Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
GAP43P17677 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GAP43P17677 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GAP43P17677 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.72■■□□□ 1.07
GAP43P17677 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.72■■□□□ 1.07
GAP43P17677 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.72■■□□□ 1.07
GAP43P17677 PRKY-204ENST00000533551 1019 ntBASIC21.72■■□□□ 1.07
GAP43P17677 MIR4651-201ENST00000582622 73 ntBASIC21.72■■□□□ 1.07
GAP43P17677 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.72■■□□□ 1.07
GAP43P17677 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.72■■□□□ 1.07
GAP43P17677 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GAP43P17677 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.72■■□□□ 1.07
GAP43P17677 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.71■■□□□ 1.07
GAP43P17677 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.71■■□□□ 1.07
GAP43P17677 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.71■■□□□ 1.07
GAP43P17677 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.71■■□□□ 1.07
GAP43P17677 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.71■■□□□ 1.07
GAP43P17677 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.71■■□□□ 1.07
GAP43P17677 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.71■■□□□ 1.07
GAP43P17677 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 MTDHP1-201ENST00000605323 784 ntBASIC21.71■■□□□ 1.07
GAP43P17677 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
GAP43P17677 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GAP43P17677 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.71■■□□□ 1.07
GAP43P17677 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GAP43P17677 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
GAP43P17677 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.7■■□□□ 1.06
GAP43P17677 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 POU5F1P3-201ENST00000428824 1078 ntBASIC21.7■■□□□ 1.06
GAP43P17677 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.7■■□□□ 1.06
GAP43P17677 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.7■■□□□ 1.06
GAP43P17677 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
GAP43P17677 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
GAP43P17677 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAP43P17677 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
GAP43P17677 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
GAP43P17677 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.69■■□□□ 1.06
GAP43P17677 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.69■■□□□ 1.06
GAP43P17677 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.69■■□□□ 1.06
GAP43P17677 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.69■■□□□ 1.06
GAP43P17677 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.69■■□□□ 1.06
GAP43P17677 AC233263.1-201ENST00000578059 224 ntBASIC21.69■■□□□ 1.06
GAP43P17677 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GAP43P17677 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
GAP43P17677 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAP43P17677 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
GAP43P17677 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.68■■□□□ 1.06
GAP43P17677 AC006058.3-201ENST00000606217 1069 ntBASIC21.68■■□□□ 1.06
GAP43P17677 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GAP43P17677 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.68■■□□□ 1.06
GAP43P17677 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
GAP43P17677 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAP43P17677 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
GAP43P17677 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GAP43P17677 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GAP43P17677 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
GAP43P17677 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GAP43P17677 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms