Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
COL11A2P13942 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.24■■□□□ 1.47
COL11A2P13942 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.24■■□□□ 1.47
COL11A2P13942 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.24■■□□□ 1.47
COL11A2P13942 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.24■■□□□ 1.47
COL11A2P13942 FP700111.2-201ENST00000619190 1892 ntBASIC24.24■■□□□ 1.47
COL11A2P13942 TMEM179-206ENST00000616017 1645 ntBASIC24.24■■□□□ 1.47
COL11A2P13942 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.23■■□□□ 1.47
COL11A2P13942 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL11A2P13942 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.23■■□□□ 1.47
COL11A2P13942 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.23■■□□□ 1.47
COL11A2P13942 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL11A2P13942 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.23■■□□□ 1.47
COL11A2P13942 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
COL11A2P13942 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.23■■□□□ 1.47
COL11A2P13942 AP003041.3-201ENST00000527151 707 ntBASIC24.23■■□□□ 1.47
COL11A2P13942 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.23■■□□□ 1.47
COL11A2P13942 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.23■■□□□ 1.47
COL11A2P13942 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.23■■□□□ 1.47
COL11A2P13942 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.23■■□□□ 1.47
COL11A2P13942 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL11A2P13942 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL11A2P13942 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.22■■□□□ 1.47
COL11A2P13942 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL11A2P13942 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL11A2P13942 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL11A2P13942 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL11A2P13942 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.22■■□□□ 1.47
COL11A2P13942 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL11A2P13942 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
COL11A2P13942 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.22■■□□□ 1.47
COL11A2P13942 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.22■■□□□ 1.47
COL11A2P13942 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL11A2P13942 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.22■■□□□ 1.47
COL11A2P13942 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 AC112907.2-201ENST00000448639 330 ntBASIC24.21■■□□□ 1.47
COL11A2P13942 TSPY17P-201ENST00000450329 467 ntBASIC24.21■■□□□ 1.47
COL11A2P13942 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.21■■□□□ 1.47
COL11A2P13942 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.21■■□□□ 1.47
COL11A2P13942 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
COL11A2P13942 KRT16P6-202ENST00000425692 1426 ntBASIC24.21■■□□□ 1.47
COL11A2P13942 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.21■■□□□ 1.47
COL11A2P13942 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.21■■□□□ 1.47
COL11A2P13942 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.21■■□□□ 1.47
COL11A2P13942 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL11A2P13942 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL11A2P13942 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL11A2P13942 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL11A2P13942 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL11A2P13942 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
COL11A2P13942 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL11A2P13942 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL11A2P13942 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL11A2P13942 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL11A2P13942 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL11A2P13942 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
COL11A2P13942 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL11A2P13942 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
COL11A2P13942 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
COL11A2P13942 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
COL11A2P13942 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
COL11A2P13942 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.19■■□□□ 1.46
COL11A2P13942 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 KRT8P8-201ENST00000434750 1448 ntBASIC24.19■■□□□ 1.46
COL11A2P13942 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
COL11A2P13942 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.19■■□□□ 1.46
COL11A2P13942 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
COL11A2P13942 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL11A2P13942 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
COL11A2P13942 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.18■■□□□ 1.46
COL11A2P13942 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.18■■□□□ 1.46
COL11A2P13942 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL11A2P13942 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
COL11A2P13942 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.18■■□□□ 1.46
COL11A2P13942 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms