Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT3P12035 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT3P12035 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT3P12035 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.73■□□□□ 0.91
KRT3P12035 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
KRT3P12035 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT3P12035 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
KRT3P12035 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT3P12035 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT3P12035 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 TFP1-202ENST00000475455 1573 ntBASIC20.72■□□□□ 0.91
KRT3P12035 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT3P12035 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT3P12035 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KRT3P12035 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KRT3P12035 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT3P12035 SOX15-203ENST00000570788 1093 ntBASIC20.72■□□□□ 0.91
KRT3P12035 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT3P12035 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT3P12035 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT3P12035 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
KRT3P12035 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.72■□□□□ 0.91
KRT3P12035 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT3P12035 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT3P12035 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT3P12035 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT3P12035 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KRT3P12035 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT3P12035 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT3P12035 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT3P12035 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT3P12035 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.71■□□□□ 0.91
KRT3P12035 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT3P12035 AC120498.8-201ENST00000614275 531 ntBASIC20.71■□□□□ 0.91
KRT3P12035 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT3P12035 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT3P12035 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT3P12035 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KRT3P12035 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT3P12035 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT3P12035 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
KRT3P12035 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KRT3P12035 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
KRT3P12035 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.7■□□□□ 0.9
KRT3P12035 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT3P12035 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
KRT3P12035 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT3P12035 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT3P12035 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT3P12035 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
KRT3P12035 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT3P12035 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT3P12035 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT3P12035 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
KRT3P12035 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.69■□□□□ 0.9
KRT3P12035 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT3P12035 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT3P12035 AC008687.6-201ENST00000596318 630 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms