Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.11■□□□□ 0.49
THBS1P07996 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS1P07996 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.11■□□□□ 0.49
THBS1P07996 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS1P07996 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
THBS1P07996 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.11■□□□□ 0.49
THBS1P07996 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.11■□□□□ 0.49
THBS1P07996 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.1■□□□□ 0.49
THBS1P07996 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 BX323043.1-201ENST00000641006 1765 ntBASIC18.1■□□□□ 0.49
THBS1P07996 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
THBS1P07996 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.1■□□□□ 0.49
THBS1P07996 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 CD99P1-205ENST00000527459 561 ntBASIC18.1■□□□□ 0.49
THBS1P07996 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.1■□□□□ 0.49
THBS1P07996 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.1■□□□□ 0.49
THBS1P07996 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.1■□□□□ 0.49
THBS1P07996 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS1P07996 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.1■□□□□ 0.49
THBS1P07996 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THBS1P07996 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.1■□□□□ 0.49
THBS1P07996 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.09■□□□□ 0.49
THBS1P07996 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.09■□□□□ 0.49
THBS1P07996 Z82202.1-201ENST00000623446 1880 ntBASIC18.09■□□□□ 0.49
THBS1P07996 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS1P07996 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS1P07996 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.09■□□□□ 0.49
THBS1P07996 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.09■□□□□ 0.49
THBS1P07996 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS1P07996 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.09■□□□□ 0.49
THBS1P07996 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.09■□□□□ 0.49
THBS1P07996 TMEM191A-211ENST00000637163 1067 ntBASIC18.09■□□□□ 0.49
THBS1P07996 HLA-B-256ENST00000639848 1089 ntBASIC18.09■□□□□ 0.49
THBS1P07996 MYC-209ENST00000641252 345 ntBASIC18.09■□□□□ 0.49
THBS1P07996 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
THBS1P07996 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
THBS1P07996 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.09■□□□□ 0.49
THBS1P07996 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
THBS1P07996 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
THBS1P07996 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS1P07996 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.08■□□□□ 0.49
THBS1P07996 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
THBS1P07996 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
THBS1P07996 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
THBS1P07996 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
THBS1P07996 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.08■□□□□ 0.49
THBS1P07996 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.08■□□□□ 0.49
THBS1P07996 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
THBS1P07996 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THBS1P07996 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
THBS1P07996 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.08■□□□□ 0.48
THBS1P07996 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.08■□□□□ 0.48
THBS1P07996 AC097658.1-201ENST00000475555 843 ntBASIC18.08■□□□□ 0.48
THBS1P07996 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THBS1P07996 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
THBS1P07996 KRT18P6-201ENST00000555540 1265 ntBASIC18.08■□□□□ 0.48
THBS1P07996 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THBS1P07996 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.08■□□□□ 0.48
THBS1P07996 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THBS1P07996 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
THBS1P07996 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
THBS1P07996 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms