Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC1P07992 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ERCC1P07992 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC1P07992 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC1P07992 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC1P07992 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC1P07992 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC1P07992 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ERCC1P07992 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ERCC1P07992 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC1P07992 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC1P07992 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC1P07992 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC1P07992 AL020996.1-203ENST00000536896 2307 ntBASIC17.4■□□□□ 0.38
ERCC1P07992 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC1P07992 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC1P07992 ITM2C-210ENST00000620962 501 ntBASIC17.4■□□□□ 0.38
ERCC1P07992 AC105020.6-201ENST00000621523 1217 ntBASIC17.4■□□□□ 0.38
ERCC1P07992 HLA-B-256ENST00000639848 1089 ntBASIC17.4■□□□□ 0.38
ERCC1P07992 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC1P07992 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC1P07992 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC1P07992 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.4■□□□□ 0.38
ERCC1P07992 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.39■□□□□ 0.38
ERCC1P07992 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC1P07992 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC1P07992 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC1P07992 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
ERCC1P07992 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC1P07992 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC1P07992 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ERCC1P07992 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC1P07992 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ERCC1P07992 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC1P07992 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ERCC1P07992 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ERCC1P07992 ESRRAP1-201ENST00000400596 1257 ntBASIC17.39■□□□□ 0.37
ERCC1P07992 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC1P07992 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC1P07992 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
ERCC1P07992 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC1P07992 AC060766.5-201ENST00000590539 871 ntBASIC17.39■□□□□ 0.37
ERCC1P07992 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC1P07992 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC1P07992 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ERCC1P07992 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC1P07992 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC1P07992 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ERCC1P07992 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC1P07992 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ERCC1P07992 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC1P07992 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC1P07992 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ERCC1P07992 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC1P07992 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC1P07992 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC1P07992 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 AC087633.2-202ENST00000565166 1439 ntBASIC17.38■□□□□ 0.37
ERCC1P07992 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC1P07992 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 BX119927.1-201ENST00000636596 1552 ntBASIC17.37■□□□□ 0.37
ERCC1P07992 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC1P07992 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms