Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 UBE2SP1-201ENST00000450587 669 ntBASIC23.6■■□□□ 1.37
APPP05067 AC133681.1-201ENST00000465482 601 ntBASIC23.6■■□□□ 1.37
APPP05067 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
APPP05067 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.6■■□□□ 1.37
APPP05067 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.6■■□□□ 1.37
APPP05067 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.6■■□□□ 1.37
APPP05067 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.6■■□□□ 1.37
APPP05067 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.6■■□□□ 1.37
APPP05067 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
APPP05067 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
APPP05067 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
APPP05067 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
APPP05067 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
APPP05067 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.59■■□□□ 1.37
APPP05067 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.59■■□□□ 1.37
APPP05067 AP006587.1-201ENST00000534129 1502 ntBASIC23.59■■□□□ 1.37
APPP05067 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.59■■□□□ 1.37
APPP05067 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
APPP05067 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.59■■□□□ 1.37
APPP05067 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.59■■□□□ 1.37
APPP05067 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
APPP05067 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
APPP05067 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.59■■□□□ 1.37
APPP05067 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.59■■□□□ 1.37
APPP05067 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
APPP05067 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
APPP05067 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
APPP05067 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.58■■□□□ 1.37
APPP05067 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
APPP05067 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
APPP05067 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.58■■□□□ 1.37
APPP05067 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.58■■□□□ 1.37
APPP05067 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.58■■□□□ 1.37
APPP05067 AC066615.1-201ENST00000640911 628 ntBASIC23.58■■□□□ 1.37
APPP05067 TCF3P1-201ENST00000423021 1937 ntBASIC23.58■■□□□ 1.37
APPP05067 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.58■■□□□ 1.37
APPP05067 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
APPP05067 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
APPP05067 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
APPP05067 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
APPP05067 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
APPP05067 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
APPP05067 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.57■■□□□ 1.36
APPP05067 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.57■■□□□ 1.36
APPP05067 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
APPP05067 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
APPP05067 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.57■■□□□ 1.36
APPP05067 AP006294.2-201ENST00000641667 209 ntBASIC23.57■■□□□ 1.36
APPP05067 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
APPP05067 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.56■■□□□ 1.36
APPP05067 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.56■■□□□ 1.36
APPP05067 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
APPP05067 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.56■■□□□ 1.36
APPP05067 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
APPP05067 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.56■■□□□ 1.36
APPP05067 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.56■■□□□ 1.36
APPP05067 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.56■■□□□ 1.36
APPP05067 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.56■■□□□ 1.36
APPP05067 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.56■■□□□ 1.36
APPP05067 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.56■■□□□ 1.36
APPP05067 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.56■■□□□ 1.36
APPP05067 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
APPP05067 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.56■■□□□ 1.36
APPP05067 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 AP001271.2-201ENST00000624018 1556 ntBASIC23.56■■□□□ 1.36
APPP05067 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APPP05067 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.55■■□□□ 1.36
APPP05067 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.55■■□□□ 1.36
APPP05067 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
APPP05067 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms