Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
IFNA1P01562 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.59■□□□□ 0.09
IFNA1P01562 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.58■□□□□ 0.09
IFNA1P01562 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
IFNA1P01562 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFNA1P01562 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.58■□□□□ 0.09
IFNA1P01562 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
IFNA1P01562 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFNA1P01562 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFNA1P01562 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.58■□□□□ 0.08
IFNA1P01562 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
IFNA1P01562 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
IFNA1P01562 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.58■□□□□ 0.08
IFNA1P01562 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.58■□□□□ 0.08
IFNA1P01562 SMUG1P1-201ENST00000590640 811 ntBASIC15.58■□□□□ 0.08
IFNA1P01562 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.58■□□□□ 0.08
IFNA1P01562 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.58■□□□□ 0.08
IFNA1P01562 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
IFNA1P01562 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
IFNA1P01562 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFNA1P01562 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.57■□□□□ 0.08
IFNA1P01562 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IFNA1P01562 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
IFNA1P01562 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.57■□□□□ 0.08
IFNA1P01562 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.57■□□□□ 0.08
IFNA1P01562 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.57■□□□□ 0.08
IFNA1P01562 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 AC135050.7-201ENST00000624508 2218 ntBASIC15.57■□□□□ 0.08
IFNA1P01562 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNA1P01562 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IFNA1P01562 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
IFNA1P01562 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
IFNA1P01562 CROCCP3-202ENST00000420820 1947 ntBASIC15.56■□□□□ 0.08
IFNA1P01562 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
IFNA1P01562 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IFNA1P01562 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.56■□□□□ 0.08
IFNA1P01562 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.56■□□□□ 0.08
IFNA1P01562 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IFNA1P01562 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.56■□□□□ 0.08
IFNA1P01562 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IFNA1P01562 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.56■□□□□ 0.08
IFNA1P01562 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
IFNA1P01562 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNA1P01562 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.55■□□□□ 0.08
IFNA1P01562 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
IFNA1P01562 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms