Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.16■□□□□ 0.82
MT-CO1P00395 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.16■□□□□ 0.82
MT-CO1P00395 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.16■□□□□ 0.82
MT-CO1P00395 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.16■□□□□ 0.82
MT-CO1P00395 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 Z99916.2-201ENST00000604037 246 ntBASIC20.16■□□□□ 0.82
MT-CO1P00395 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.16■□□□□ 0.82
MT-CO1P00395 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MT-CO1P00395 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.16■□□□□ 0.82
MT-CO1P00395 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
MT-CO1P00395 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.16■□□□□ 0.82
MT-CO1P00395 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MT-CO1P00395 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 RPS2P4-201ENST00000476944 856 ntBASIC20.15■□□□□ 0.82
MT-CO1P00395 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
MT-CO1P00395 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.15■□□□□ 0.82
MT-CO1P00395 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.15■□□□□ 0.82
MT-CO1P00395 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 NBPF21P-201ENST00000425093 1451 ntBASIC20.15■□□□□ 0.82
MT-CO1P00395 AC018553.1-201ENST00000616682 1458 ntBASIC20.15■□□□□ 0.82
MT-CO1P00395 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 AC116351.2-201ENST00000606540 1585 ntBASIC20.15■□□□□ 0.82
MT-CO1P00395 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
MT-CO1P00395 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.15■□□□□ 0.82
MT-CO1P00395 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.15■□□□□ 0.82
MT-CO1P00395 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-CO1P00395 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
MT-CO1P00395 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
MT-CO1P00395 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-CO1P00395 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.14■□□□□ 0.81
MT-CO1P00395 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.14■□□□□ 0.81
MT-CO1P00395 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-CO1P00395 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.14■□□□□ 0.81
MT-CO1P00395 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MT-CO1P00395 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MT-CO1P00395 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.14■□□□□ 0.81
MT-CO1P00395 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-CO1P00395 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 AL691432.2-201ENST00000607222 2038 ntBASIC20.14■□□□□ 0.81
MT-CO1P00395 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-CO1P00395 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-CO1P00395 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MT-CO1P00395 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MT-CO1P00395 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.13■□□□□ 0.81
MT-CO1P00395 AFG3L1P-217ENST00000557444 2447 ntBASIC20.13■□□□□ 0.81
MT-CO1P00395 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MT-CO1P00395 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MT-CO1P00395 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
MT-CO1P00395 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
MT-CO1P00395 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.13■□□□□ 0.81
MT-CO1P00395 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.13■□□□□ 0.81
MT-CO1P00395 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.13■□□□□ 0.81
MT-CO1P00395 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MT-CO1P00395 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MT-CO1P00395 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-CO1P00395 PHGDH-210ENST00000641115 1638 ntBASIC20.13■□□□□ 0.81
MT-CO1P00395 TFP1-202ENST00000475455 1573 ntBASIC20.12■□□□□ 0.81
MT-CO1P00395 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-CO1P00395 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.12■□□□□ 0.81
MT-CO1P00395 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MT-CO1P00395 AC099778.1-201ENST00000568593 1911 ntBASIC20.12■□□□□ 0.81
MT-CO1P00395 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-CO1P00395 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.12■□□□□ 0.81
MT-CO1P00395 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MT-CO1P00395 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-CO1P00395 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
MT-CO1P00395 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms