Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPP1R3DO95685 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.75■□□□□ 0.43
PPP1R3DO95685 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 TNXA-203ENST00000507684 2038 ntBASIC17.74■□□□□ 0.43
PPP1R3DO95685 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 AC004911.1-201ENST00000416316 871 ntBASIC17.74■□□□□ 0.43
PPP1R3DO95685 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP1R3DO95685 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.74■□□□□ 0.43
PPP1R3DO95685 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP1R3DO95685 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 AL032819.2-201ENST00000624543 2162 ntBASIC17.73■□□□□ 0.43
PPP1R3DO95685 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP1R3DO95685 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP1R3DO95685 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP1R3DO95685 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.72■□□□□ 0.43
PPP1R3DO95685 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP1R3DO95685 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms