Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CD177P1-201ENST00000606252 935 ntBASIC24.9■■□□□ 1.58
CACNA1FO60840 AP001412.1-201ENST00000608405 714 ntBASIC24.9■■□□□ 1.58
CACNA1FO60840 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.9■■□□□ 1.58
CACNA1FO60840 AC112907.3-201ENST00000577781 2400 ntBASIC24.9■■□□□ 1.58
CACNA1FO60840 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.9■■□□□ 1.58
CACNA1FO60840 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CACNA1FO60840 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
CACNA1FO60840 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.89■■□□□ 1.58
CACNA1FO60840 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.89■■□□□ 1.58
CACNA1FO60840 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CACNA1FO60840 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.89■■□□□ 1.58
CACNA1FO60840 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.89■■□□□ 1.58
CACNA1FO60840 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CACNA1FO60840 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
CACNA1FO60840 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CACNA1FO60840 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CACNA1FO60840 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CACNA1FO60840 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CACNA1FO60840 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
CACNA1FO60840 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
CACNA1FO60840 AL031985.4-201ENST00000642138 673 ntBASIC24.89■■□□□ 1.57
CACNA1FO60840 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CACNA1FO60840 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CACNA1FO60840 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CACNA1FO60840 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.88■■□□□ 1.57
CACNA1FO60840 AC125437.2-201ENST00000625180 2167 ntBASIC24.88■■□□□ 1.57
CACNA1FO60840 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.88■■□□□ 1.57
CACNA1FO60840 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.88■■□□□ 1.57
CACNA1FO60840 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CACNA1FO60840 AC073195.1-201ENST00000607241 877 ntBASIC24.88■■□□□ 1.57
CACNA1FO60840 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CACNA1FO60840 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CACNA1FO60840 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CACNA1FO60840 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CACNA1FO60840 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
CACNA1FO60840 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CACNA1FO60840 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CACNA1FO60840 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
CACNA1FO60840 RPS2P4-201ENST00000476944 856 ntBASIC24.87■■□□□ 1.57
CACNA1FO60840 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.87■■□□□ 1.57
CACNA1FO60840 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
CACNA1FO60840 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
CACNA1FO60840 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CACNA1FO60840 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.86■■□□□ 1.57
CACNA1FO60840 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CACNA1FO60840 AL596275.1-201ENST00000423464 877 ntBASIC24.86■■□□□ 1.57
CACNA1FO60840 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.86■■□□□ 1.57
CACNA1FO60840 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.86■■□□□ 1.57
CACNA1FO60840 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CACNA1FO60840 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CACNA1FO60840 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
CACNA1FO60840 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CACNA1FO60840 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CACNA1FO60840 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.86■■□□□ 1.57
CACNA1FO60840 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.85■■□□□ 1.57
CACNA1FO60840 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.85■■□□□ 1.57
CACNA1FO60840 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CACNA1FO60840 AP002982.1-201ENST00000492365 877 ntBASIC24.85■■□□□ 1.57
CACNA1FO60840 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.85■■□□□ 1.57
CACNA1FO60840 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.85■■□□□ 1.57
CACNA1FO60840 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CACNA1FO60840 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CACNA1FO60840 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.85■■□□□ 1.57
CACNA1FO60840 MIR4785-201ENST00000585005 73 ntBASIC24.85■■□□□ 1.57
CACNA1FO60840 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.85■■□□□ 1.57
CACNA1FO60840 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.85■■□□□ 1.57
CACNA1FO60840 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CACNA1FO60840 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CACNA1FO60840 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CACNA1FO60840 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.84■■□□□ 1.57
CACNA1FO60840 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.84■■□□□ 1.57
CACNA1FO60840 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CACNA1FO60840 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.84■■□□□ 1.57
CACNA1FO60840 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.84■■□□□ 1.57
CACNA1FO60840 TSPY7P-201ENST00000431358 1114 ntBASIC24.84■■□□□ 1.57
CACNA1FO60840 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms