Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.82■□□□□ 0.92
TRANK1O15050 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.82■□□□□ 0.92
TRANK1O15050 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 KRT18P38-201ENST00000449496 1282 ntBASIC20.82■□□□□ 0.92
TRANK1O15050 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.82■□□□□ 0.92
TRANK1O15050 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 SPDYE13P-201ENST00000445314 798 ntBASIC20.82■□□□□ 0.92
TRANK1O15050 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.82■□□□□ 0.92
TRANK1O15050 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.82■□□□□ 0.92
TRANK1O15050 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.82■□□□□ 0.92
TRANK1O15050 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRANK1O15050 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.81■□□□□ 0.92
TRANK1O15050 MIR3180-1-201ENST00000580374 94 ntBASIC20.81■□□□□ 0.92
TRANK1O15050 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.81■□□□□ 0.92
TRANK1O15050 MIR3180-3-201ENST00000584616 94 ntBASIC20.81■□□□□ 0.92
TRANK1O15050 AC011298.2-201ENST00000617989 482 ntBASIC20.81■□□□□ 0.92
TRANK1O15050 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRANK1O15050 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRANK1O15050 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRANK1O15050 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRANK1O15050 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRANK1O15050 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
TRANK1O15050 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.81■□□□□ 0.92
TRANK1O15050 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 AC012313.10-201ENST00000623509 926 ntBASIC20.81■□□□□ 0.92
TRANK1O15050 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.81■□□□□ 0.92
TRANK1O15050 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 PRSS44-201ENST00000515154 1146 ntBASIC20.81■□□□□ 0.92
TRANK1O15050 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 AC116351.2-201ENST00000606540 1585 ntBASIC20.81■□□□□ 0.92
TRANK1O15050 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRANK1O15050 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.8■□□□□ 0.92
TRANK1O15050 AL671883.3-201ENST00000603274 991 ntBASIC20.8■□□□□ 0.92
TRANK1O15050 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 KRT8P17-201ENST00000453110 1448 ntBASIC20.8■□□□□ 0.92
TRANK1O15050 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.8■□□□□ 0.92
TRANK1O15050 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
TRANK1O15050 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
TRANK1O15050 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRANK1O15050 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRANK1O15050 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.8■□□□□ 0.92
TRANK1O15050 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRANK1O15050 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRANK1O15050 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.79■□□□□ 0.92
TRANK1O15050 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TRANK1O15050 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.79■□□□□ 0.92
TRANK1O15050 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.79■□□□□ 0.92
TRANK1O15050 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TRANK1O15050 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRANK1O15050 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRANK1O15050 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.78■□□□□ 0.92
TRANK1O15050 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRANK1O15050 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRANK1O15050 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRANK1O15050 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRANK1O15050 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRANK1O15050 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.77■□□□□ 0.92
TRANK1O15050 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms