Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 AC092437.1-201ENST00000624794 1048 ntBASIC19.1■□□□□ 0.65
UBFD1O14562 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
UBFD1O14562 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
UBFD1O14562 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.09■□□□□ 0.65
UBFD1O14562 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UBFD1O14562 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.09■□□□□ 0.65
UBFD1O14562 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.09■□□□□ 0.65
UBFD1O14562 AC133552.2-202ENST00000575694 574 ntBASIC19.09■□□□□ 0.65
UBFD1O14562 AL050303.2-201ENST00000619798 666 ntBASIC19.09■□□□□ 0.65
UBFD1O14562 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
UBFD1O14562 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.09■□□□□ 0.65
UBFD1O14562 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UBFD1O14562 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
UBFD1O14562 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBFD1O14562 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBFD1O14562 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBFD1O14562 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBFD1O14562 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
UBFD1O14562 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBFD1O14562 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
UBFD1O14562 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.08■□□□□ 0.64
UBFD1O14562 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBFD1O14562 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.08■□□□□ 0.64
UBFD1O14562 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.08■□□□□ 0.64
UBFD1O14562 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.08■□□□□ 0.64
UBFD1O14562 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.08■□□□□ 0.64
UBFD1O14562 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
UBFD1O14562 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UBFD1O14562 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBFD1O14562 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
UBFD1O14562 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBFD1O14562 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBFD1O14562 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBFD1O14562 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.07■□□□□ 0.64
UBFD1O14562 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 AC116351.2-201ENST00000606540 1585 ntBASIC19.07■□□□□ 0.64
UBFD1O14562 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBFD1O14562 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
UBFD1O14562 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
UBFD1O14562 LSM12P1-201ENST00000411836 588 ntBASIC19.07■□□□□ 0.64
UBFD1O14562 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.07■□□□□ 0.64
UBFD1O14562 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 LINC01465-201ENST00000408887 1940 ntBASIC19.07■□□□□ 0.64
UBFD1O14562 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBFD1O14562 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.07■□□□□ 0.64
UBFD1O14562 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBFD1O14562 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBFD1O14562 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.06■□□□□ 0.64
UBFD1O14562 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.06■□□□□ 0.64
UBFD1O14562 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.06■□□□□ 0.64
UBFD1O14562 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.06■□□□□ 0.64
UBFD1O14562 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.06■□□□□ 0.64
UBFD1O14562 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
UBFD1O14562 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.06■□□□□ 0.64
UBFD1O14562 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBFD1O14562 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBFD1O14562 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBFD1O14562 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBFD1O14562 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBFD1O14562 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.06■□□□□ 0.64
UBFD1O14562 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBFD1O14562 AC073111.5-205ENST00000641717 521 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms