Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX1O00570 FAM99A-202ENST00000538190 1989 ntBASIC21.04■□□□□ 0.96
SOX1O00570 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX1O00570 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX1O00570 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX1O00570 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX1O00570 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX1O00570 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SOX1O00570 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SOX1O00570 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SOX1O00570 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX1O00570 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SOX1O00570 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SOX1O00570 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX1O00570 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
SOX1O00570 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.03■□□□□ 0.96
SOX1O00570 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX1O00570 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SOX1O00570 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.03■□□□□ 0.96
SOX1O00570 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SOX1O00570 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.03■□□□□ 0.96
SOX1O00570 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX1O00570 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX1O00570 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.02■□□□□ 0.96
SOX1O00570 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.02■□□□□ 0.96
SOX1O00570 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.02■□□□□ 0.96
SOX1O00570 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.02■□□□□ 0.96
SOX1O00570 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX1O00570 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOX1O00570 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.02■□□□□ 0.96
SOX1O00570 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX1O00570 SLC25A1P1-201ENST00000528351 927 ntBASIC21.02■□□□□ 0.96
SOX1O00570 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SOX1O00570 AL139424.1-201ENST00000607572 797 ntBASIC21.02■□□□□ 0.96
SOX1O00570 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX1O00570 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SOX1O00570 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.02■□□□□ 0.96
SOX1O00570 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOX1O00570 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.02■□□□□ 0.95
SOX1O00570 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.01■□□□□ 0.95
SOX1O00570 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.01■□□□□ 0.95
SOX1O00570 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SOX1O00570 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.01■□□□□ 0.95
SOX1O00570 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.01■□□□□ 0.95
SOX1O00570 TUBB8P6-201ENST00000436895 1288 ntBASIC21.01■□□□□ 0.95
SOX1O00570 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.01■□□□□ 0.95
SOX1O00570 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SOX1O00570 AL121912.1-201ENST00000603683 238 ntBASIC21.01■□□□□ 0.95
SOX1O00570 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.01■□□□□ 0.95
SOX1O00570 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SOX1O00570 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SOX1O00570 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SOX1O00570 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SOX1O00570 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX1O00570 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21■□□□□ 0.95
SOX1O00570 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SOX1O00570 AC092597.1-201ENST00000487352 616 ntBASIC21■□□□□ 0.95
SOX1O00570 PNN-202ENST00000553331 656 ntTSL 3 BASIC21■□□□□ 0.95
SOX1O00570 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21■□□□□ 0.95
SOX1O00570 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21■□□□□ 0.95
SOX1O00570 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21■□□□□ 0.95
SOX1O00570 AL121772.3-201ENST00000610840 674 ntBASIC21■□□□□ 0.95
SOX1O00570 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21■□□□□ 0.95
SOX1O00570 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21■□□□□ 0.95
SOX1O00570 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SOX1O00570 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SOX1O00570 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms