Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HLA-G-202ENST00000376815 851 ntBASIC18.66■□□□□ 0.58
UPK1AO00322 HLA-G-203ENST00000376818 1127 ntBASIC18.66■□□□□ 0.58
UPK1AO00322 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK1AO00322 DUSP5P2-201ENST00000426873 1033 ntBASIC18.66■□□□□ 0.58
UPK1AO00322 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UPK1AO00322 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.66■□□□□ 0.58
UPK1AO00322 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK1AO00322 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK1AO00322 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UPK1AO00322 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK1AO00322 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1AO00322 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.65■□□□□ 0.58
UPK1AO00322 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1AO00322 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1AO00322 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UPK1AO00322 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1AO00322 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1AO00322 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK1AO00322 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK1AO00322 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.64■□□□□ 0.58
UPK1AO00322 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK1AO00322 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.64■□□□□ 0.57
UPK1AO00322 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1AO00322 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPK1AO00322 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1AO00322 AC091874.3-201ENST00000512672 1195 ntBASIC18.64■□□□□ 0.57
UPK1AO00322 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 MIR4758-201ENST00000577688 71 ntBASIC18.64■□□□□ 0.57
UPK1AO00322 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1AO00322 AL109923.1-201ENST00000618799 583 ntBASIC18.64■□□□□ 0.57
UPK1AO00322 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.64■□□□□ 0.57
UPK1AO00322 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.64■□□□□ 0.57
UPK1AO00322 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.64■□□□□ 0.57
UPK1AO00322 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPK1AO00322 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1AO00322 KRT16P6-202ENST00000425692 1426 ntBASIC18.64■□□□□ 0.57
UPK1AO00322 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPK1AO00322 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPK1AO00322 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1AO00322 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK1AO00322 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
UPK1AO00322 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK1AO00322 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UPK1AO00322 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.63■□□□□ 0.57
UPK1AO00322 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK1AO00322 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
UPK1AO00322 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1AO00322 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK1AO00322 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UPK1AO00322 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms