Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.27■□□□□ 0.67
EIF3FO00303 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EIF3FO00303 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EIF3FO00303 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.26■□□□□ 0.67
EIF3FO00303 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
EIF3FO00303 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.26■□□□□ 0.67
EIF3FO00303 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
EIF3FO00303 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.26■□□□□ 0.67
EIF3FO00303 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.26■□□□□ 0.67
EIF3FO00303 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
EIF3FO00303 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.26■□□□□ 0.67
EIF3FO00303 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.26■□□□□ 0.67
EIF3FO00303 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.26■□□□□ 0.67
EIF3FO00303 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.26■□□□□ 0.67
EIF3FO00303 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
EIF3FO00303 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.26■□□□□ 0.67
EIF3FO00303 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EIF3FO00303 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EIF3FO00303 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
EIF3FO00303 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.25■□□□□ 0.67
EIF3FO00303 YBX1P10-201ENST00000444752 975 ntBASIC19.25■□□□□ 0.67
EIF3FO00303 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.25■□□□□ 0.67
EIF3FO00303 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EIF3FO00303 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.25■□□□□ 0.67
EIF3FO00303 AC124283.5-201ENST00000624661 1809 ntBASIC19.25■□□□□ 0.67
EIF3FO00303 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EIF3FO00303 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.25■□□□□ 0.67
EIF3FO00303 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EIF3FO00303 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EIF3FO00303 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
EIF3FO00303 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EIF3FO00303 POM121L13P-201ENST00000422362 380 ntBASIC19.24■□□□□ 0.67
EIF3FO00303 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.24■□□□□ 0.67
EIF3FO00303 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.24■□□□□ 0.67
EIF3FO00303 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
EIF3FO00303 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EIF3FO00303 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EIF3FO00303 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
EIF3FO00303 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
EIF3FO00303 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.23■□□□□ 0.67
EIF3FO00303 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
EIF3FO00303 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 AP006587.1-201ENST00000534129 1502 ntBASIC19.23■□□□□ 0.67
EIF3FO00303 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms