Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 TFP1-202ENST00000475455 1573 ntBASIC16.34■□□□□ 0.21
RNF223E7ERA6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 DPP3P2-201ENST00000416030 1696 ntBASIC16.34■□□□□ 0.21
RNF223E7ERA6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 MTND4LP12-201ENST00000448237 295 ntBASIC16.34■□□□□ 0.21
RNF223E7ERA6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 AC130371.2-201ENST00000619443 611 ntBASIC16.34■□□□□ 0.21
RNF223E7ERA6 AC116562.4-202ENST00000641738 218 ntBASIC16.34■□□□□ 0.21
RNF223E7ERA6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 AC018553.1-201ENST00000616682 1458 ntBASIC16.34■□□□□ 0.21
RNF223E7ERA6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF223E7ERA6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF223E7ERA6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
RNF223E7ERA6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF223E7ERA6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.33■□□□□ 0.21
RNF223E7ERA6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF223E7ERA6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF223E7ERA6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF223E7ERA6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF223E7ERA6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 RNF152P1-201ENST00000397754 604 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 AC012497.1-201ENST00000429392 575 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 AC092647.4-201ENST00000457211 535 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 AP000692.2-201ENST00000608391 879 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 KRT16P6-202ENST00000425692 1426 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 RCC2P6-201ENST00000526625 1557 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF223E7ERA6 AC005229.4-201ENST00000610085 2198 ntBASIC16.33■□□□□ 0.2
RNF223E7ERA6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF223E7ERA6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 MFAP1P1-201ENST00000442257 1255 ntBASIC16.32■□□□□ 0.2
RNF223E7ERA6 CCR12P-201ENST00000446203 998 ntBASIC16.32■□□□□ 0.2
RNF223E7ERA6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF223E7ERA6 FP700111.2-201ENST00000619190 1892 ntBASIC16.32■□□□□ 0.2
RNF223E7ERA6 AP003400.6-201ENST00000624698 740 ntBASIC16.32■□□□□ 0.2
RNF223E7ERA6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms