Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM3A6NNA2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.33■□□□□ 0.85
SRRM3A6NNA2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM3A6NNA2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.33■□□□□ 0.84
SRRM3A6NNA2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.33■□□□□ 0.84
SRRM3A6NNA2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 AC005224.4-201ENST00000583262 1652 ntBASIC20.32■□□□□ 0.84
SRRM3A6NNA2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 AL512625.2-201ENST00000417533 625 ntBASIC20.32■□□□□ 0.84
SRRM3A6NNA2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 SNORA78-201ENST00000459373 127 ntBASIC20.32■□□□□ 0.84
SRRM3A6NNA2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 AP003097.1-201ENST00000530657 1135 ntBASIC20.32■□□□□ 0.84
SRRM3A6NNA2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
SRRM3A6NNA2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.31■□□□□ 0.84
SRRM3A6NNA2 AL049812.1-201ENST00000432563 2267 ntBASIC20.31■□□□□ 0.84
SRRM3A6NNA2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.31■□□□□ 0.84
SRRM3A6NNA2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 AC008694.1-202ENST00000636953 945 ntBASIC20.31■□□□□ 0.84
SRRM3A6NNA2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM3A6NNA2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 AC091874.3-201ENST00000512672 1195 ntBASIC20.3■□□□□ 0.84
SRRM3A6NNA2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms