Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 AP001160.3-201ENST00000601484 763 ntBASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 RASA4CP-201ENST00000424092 1398 ntBASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 IRS3P-201ENST00000223076 1006 ntBASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.3■□□□□ 0.36
TRDV1A0A1B0GX56 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 AC090164.3-201ENST00000610780 2143 ntBASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 AP001330.3-201ENST00000520123 633 ntBASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 AL031963.3-201ENST00000606441 850 ntBASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 AC104187.1-201ENST00000607510 612 ntBASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRDV1A0A1B0GX56 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 SLC7A5P1-201ENST00000568957 537 ntBASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms