Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 AL135905.2-201ENST00000584934 1404 ntBASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC092667.1-201ENST00000434301 2586 ntBASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC012618.2-201ENST00000428058 849 ntBASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 RARRES2P10-201ENST00000564312 460 ntBASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGHV4-28A0A0C4DH34 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
IGHV4-28A0A0C4DH34 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGHV4-28A0A0C4DH34 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGHV4-28A0A0C4DH34 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGHV4-28A0A0C4DH34 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGHV4-28A0A0C4DH34 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGHV4-28A0A0C4DH34 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 RPS2P55-201ENST00000397318 883 ntBASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL596275.1-201ENST00000423464 877 ntBASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC107956.1-201ENST00000494359 873 ntBASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 TFP1-202ENST00000475455 1573 ntBASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV4-28A0A0C4DH34 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 HTR7P1-201ENST00000538670 1336 ntBASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 SNORA78-201ENST00000459373 127 ntBASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC233702.5-201ENST00000584107 538 ntBASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 AP001412.1-201ENST00000608405 714 ntBASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms