Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 NIFKP9-201ENST00000419265 221 ntBASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 PHGDH-210ENST00000641115 1638 ntBASIC13.9□□□□□ -0.19
TRAV10A0A0B4J240 KRT16P1-201ENST00000399124 1418 ntBASIC13.9□□□□□ -0.19
TRAV10A0A0B4J240 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 AC018553.1-201ENST00000616682 1458 ntBASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TUBB8P6-201ENST00000436895 1288 ntBASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 NUDT16P1-203ENST00000513809 620 ntBASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 CR392000.1-201ENST00000624770 1228 ntBASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 AC133561.5-201ENST00000635547 218 ntBASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV10A0A0B4J240 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 TFP1-202ENST00000475455 1573 ntBASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 AC087499.1-201ENST00000418141 1075 ntBASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 AC073130.3-201ENST00000624389 2278 ntBASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV10A0A0B4J240 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms