Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 C2orf69P4-201ENST00000565394 541 ntBASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV30A0A087WSZ9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV30A0A087WSZ9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 PHGDH-210ENST00000641115 1638 ntBASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms