Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC009120.7-201ENST00000623452 780 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC090772.4-201ENST00000623599 362 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 WBP11P1-201ENST00000562560 1931 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC011504.1-201ENST00000623331 4103 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 MAPK10-287ENST00000641217 3037 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AL136984.1-201ENST00000607611 1893 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SNORD8-201ENST00000363915 110 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 CYP4F30P-202ENST00000420048 405 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 PNRC2P1-201ENST00000423940 420 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC092865.3-201ENST00000425390 1026 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC112492.2-201ENST00000432774 1030 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC094019.1-201ENST00000434678 472 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 PCNPP2-201ENST00000441651 455 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SL369P-201ENST00000477138 299 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 RPL12P31-201ENST00000478433 450 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC010343.2-201ENST00000510162 224 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 SNORA31.13-201ENST00000516624 135 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AL583832.1-201ENST00000603227 784 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AL359513.1-201ENST00000614364 557 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 AC078880.5-201ENST00000617845 421 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 OR7E91P-202ENST00000642062 1198 ntBASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A3BPQ9Y5P4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 VPS35P1-201ENST00000563400 1518 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 RNA5SP431-201ENST00000410312 120 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SKP161-201ENST00000411110 305 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 RNA5SP498-201ENST00000411342 120 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AL158825.1-201ENST00000414735 521 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC008173.1-201ENST00000418901 264 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 RPL7P33-201ENST00000444159 742 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC069540.1-201ENST00000446320 988 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC093801.2-201ENST00000503966 1050 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC138866.2-201ENST00000508650 584 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC108103.1-201ENST00000511286 446 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms