Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL162456.1-201ENST00000634535 2006 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL442128.2-201ENST00000620246 1824 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 RNA5SP394-201ENST00000364216 119 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 HMGB1P20-201ENST00000402555 677 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL354868.1-201ENST00000417077 482 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC127526.2-201ENST00000426436 775 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 HMGB3P24-201ENST00000433260 622 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 KRT8P51-201ENST00000438938 274 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL157777.1-201ENST00000468100 304 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 NENFP3-201ENST00000503735 313 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AP000619.2-201ENST00000546014 969 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 SNORD95-201ENST00000579879 68 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC025857.2-201ENST00000602711 238 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AL132656.3-201ENST00000606384 1595 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 AC004656.1-201ENST00000568479 4951 ntBASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP2Q9UDT6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RPS2P45-201ENST00000469997 2057 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 MIR323A-201ENST00000362199 86 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RN7SKP286-201ENST00000410894 299 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AK4P4-201ENST00000419465 646 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AC073410.1-201ENST00000435125 589 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 OSTCP1-201ENST00000455507 450 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RPS27AP2-201ENST00000457576 465 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AC023141.9-201ENST00000458734 412 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 ST13P12-201ENST00000508958 1094 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 MIR2117-201ENST00000516780 80 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 TMEM97P2-201ENST00000517841 403 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AC136777.2-201ENST00000522979 358 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AL049779.3-201ENST00000557141 606 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RNA5SP440-201ENST00000612665 119 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RN7SL544P-201ENST00000617232 284 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AL445670.1-201ENST00000618889 801 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RN7SL763P-201ENST00000620922 284 ntBASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
CLIP2Q9UDT6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 SNORA51.1-201ENST00000363243 140 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 SDHDP6-201ENST00000414693 480 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 RPL34P3-201ENST00000421454 338 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 AL662874.1-201ENST00000426065 230 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 RPSAP37-201ENST00000470913 821 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 RPS17P15-201ENST00000475609 349 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 RPL38P3-201ENST00000484463 213 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 RN7SL284P-201ENST00000498823 275 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms