Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GCNT1P4-201ENST00000404096 329 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL136131.1-201ENST00000406079 803 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL713922.1-201ENST00000416477 747 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 SEC63P1-201ENST00000425785 1258 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC242426.1-201ENST00000435270 960 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 PMS2P9-201ENST00000441237 515 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 RPL5P7-201ENST00000444235 813 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 BZW1P1-201ENST00000454901 1240 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC138866.2-201ENST00000508650 584 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC013701.1-201ENST00000522657 465 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC068305.2-201ENST00000550567 1205 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC106734.1-201ENST00000568646 663 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC126365.2-201ENST00000580630 379 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL391001.1-201ENST00000602747 715 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL359704.2-201ENST00000604335 521 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC026741.1-201ENST00000605892 482 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL445647.2-201ENST00000615170 130 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC093875.1-201ENST00000623688 504 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL357140.4-201ENST00000636827 412 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC092451.3-201ENST00000625067 1343 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC034229.2-201ENST00000566945 2508 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 SMG1P7-201ENST00000565246 2704 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 RNA5SP433-201ENST00000364491 114 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 RNU6-1257P-201ENST00000384625 110 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL157702.1-201ENST00000398764 426 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC069282.1-201ENST00000411911 526 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL035422.1-201ENST00000414193 397 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 RPL23AP18-201ENST00000416139 468 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 PNRC2P1-201ENST00000423940 420 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 NAP1L4P2-201ENST00000425958 899 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 CACYBPP1-201ENST00000438592 684 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 OR2AF1P-201ENST00000454899 889 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 NDUFA5P5-201ENST00000468361 342 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 RN7SL643P-201ENST00000471845 291 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 RNU5A-7P-201ENST00000515979 116 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 SNORA31.13-201ENST00000516624 135 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC090616.1-201ENST00000583895 447 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL049844.2-201ENST00000604280 628 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms