Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 EIF4E2P2-201ENST00000492033 736 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC092349.1-201ENST00000504903 310 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 OR4A17P-201ENST00000526032 904 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC004232.2-201ENST00000574245 821 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 OR51C1P-201ENST00000608504 942 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 uc_338.31-201ENST00000615595 186 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 MIR6721-201ENST00000617181 87 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC090181.3-201ENST00000624777 1514 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC092681.1-201ENST00000297369 291 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 SNORA21-201ENST00000362423 132 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 RNU1-134P-201ENST00000362935 165 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 RNU6-233P-201ENST00000410845 141 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC104164.1-201ENST00000460282 590 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC091544.1-201ENST00000484702 348 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 RPL9P15-201ENST00000491096 532 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC083795.1-201ENST00000491760 320 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC007346.1-201ENST00000569208 867 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 TXNP4-201ENST00000575018 310 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 FAM72A-208ENST00000607379 1139 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC073389.3-201ENST00000609434 935 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC008833.1-201ENST00000611633 691 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AP001052.1-201ENST00000626421 99 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AC073488.6-201ENST00000632293 754 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 CASC19-274ENST00000642018 970 ntBASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCNB1IP1Q9NPC3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CCNB1IP1Q9NPC3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.34□□□□□ -1.56
CCNB1IP1Q9NPC3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.56
CCNB1IP1Q9NPC3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.34□□□□□ -1.56
CCNB1IP1Q9NPC3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCNB1IP1Q9NPC3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.34□□□□□ -1.56
CCNB1IP1Q9NPC3 AC018717.1-201ENST00000457712 1505 ntBASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 PARP4P2-201ENST00000446672 3326 ntBASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 MTHFD2P5-201ENST00000320415 844 ntBASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 RNA5SP279-201ENST00000365513 117 ntBASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 AC096921.1-201ENST00000411661 375 ntBASIC5.33□□□□□ -1.56
CCNB1IP1Q9NPC3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms