Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 U8.3-201ENST00000363321 132 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 Y_RNA.216-201ENST00000364205 93 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 RNU4-7P-201ENST00000364758 141 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 RNU6-809P-201ENST00000384461 107 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 MIR606-201ENST00000384851 96 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 MIR506-201ENST00000384998 124 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 SNORD115.1-201ENST00000391109 76 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC231533.2-201ENST00000419045 978 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 PDCL2P1-201ENST00000419302 352 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 ISCA1P6-201ENST00000427740 390 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 RPS27AP6-201ENST00000427962 448 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC133104.1-201ENST00000429100 218 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 RPL22P17-201ENST00000438729 315 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 RPS7P4-201ENST00000444127 582 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 RPSAP49-201ENST00000445182 886 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC132479.1-201ENST00000449160 144 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 RPS27P12-201ENST00000464146 258 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 RPS15AP36-201ENST00000492022 382 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 NTAN1P2-201ENST00000515730 940 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC105029.1-201ENST00000520250 669 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC034268.2-201ENST00000571784 482 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC093826.2-201ENST00000579042 108 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC104785.1-201ENST00000603220 588 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC048344.3-201ENST00000605512 251 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AL355974.3-201ENST00000617383 467 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC026634.1-201ENST00000634369 198 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 HCG18-244ENST00000602516 2890 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 AC007614.2-201ENST00000569877 1851 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 PSMC1P7-201ENST00000495689 1315 ntBASIC8.25□□□□□ -1.09
PHOX2BQ99453 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PHOX2BQ99453 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
PHOX2BQ99453 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 IMMTP1-201ENST00000435590 2219 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 RNA5SP463-201ENST00000363030 120 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 Y_RNA.419-201ENST00000384041 102 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 RNU6-532P-201ENST00000384318 107 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 RN7SKP32-201ENST00000410167 303 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC073264.1-201ENST00000411508 416 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 PUDPP1-201ENST00000421058 495 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL445669.1-201ENST00000426743 755 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 RPL7P4-203ENST00000430239 730 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 CBX1P1-201ENST00000440184 427 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 EIF5AP4-201ENST00000441206 465 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 RPS27AP15-201ENST00000447672 466 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC234771.3-201ENST00000454984 622 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms