Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 RNU1-5P-201ENST00000362684 144 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 RPL12P23-201ENST00000405880 490 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AL139100.1-201ENST00000408001 498 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 DHFRP2-201ENST00000414224 547 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC013470.3-201ENST00000420252 1194 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 MTND6P18-201ENST00000439477 513 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 SNRPFP2-201ENST00000440710 251 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC239798.3-201ENST00000454459 408 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AL049874.2-201ENST00000492636 288 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 MINOS1P4-201ENST00000515470 318 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 MIR2117-201ENST00000516780 80 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC024940.3-201ENST00000538551 316 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC008126.1-201ENST00000549019 480 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC091059.2-201ENST00000623355 614 ntBASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.43□□□□□ -1.7
SMIM12Q96EX1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AL731566.1-201ENST00000620490 1937 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 RBMY1HP-201ENST00000382759 1389 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC245100.2-201ENST00000454544 1679 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 SNORA48.4-201ENST00000391089 134 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 RNA5SP156-201ENST00000410250 110 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AL133482.1-201ENST00000415988 498 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 PTPN2P1-201ENST00000423212 1072 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 GTF2IP14-201ENST00000441415 586 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC015983.1-201ENST00000441577 373 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 TRIM60P16-201ENST00000444048 694 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 OR7E22P-201ENST00000478335 1035 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC098583.1-201ENST00000480875 255 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 RN7SL413P-201ENST00000482700 297 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AL079303.1-201ENST00000486611 463 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 ENPP7P11-201ENST00000505915 627 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC105384.2-201ENST00000508433 640 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC011411.1-201ENST00000509592 876 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC097460.2-201ENST00000511857 741 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC114940.1-201ENST00000512162 1265 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC098976.1-201ENST00000513014 541 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC021146.10-201ENST00000515628 706 ntBASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM12Q96EX1 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms