Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC090958.1-201ENST00000511122 351 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.74□□□□□ -1.33
HPS3Q969F9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.74□□□□□ -1.33
HPS3Q969F9 CR383658.1-201ENST00000514609 734 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC138701.1-201ENST00000524329 714 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.74□□□□□ -1.33
HPS3Q969F9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.74□□□□□ -1.33
HPS3Q969F9 HMGN2P47-201ENST00000559378 272 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.74□□□□□ -1.33
HPS3Q969F9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.74□□□□□ -1.33
HPS3Q969F9 AP004372.1-201ENST00000604842 844 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC015722.2-201ENST00000622210 551 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC090772.4-201ENST00000623599 362 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC019080.5-201ENST00000624891 757 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
HPS3Q969F9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 AC112255.1-201ENST00000624070 2493 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.74□□□□□ -1.33
HPS3Q969F9 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
HPS3Q969F9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 Z95114.1-201ENST00000624264 14574 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 IMMTP1-201ENST00000435590 2219 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 PSG10P-201ENST00000501199 1500 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HPS3Q969F9 SNORA72.3-201ENST00000365074 132 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 RPL10P10-201ENST00000403509 664 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 GCNT1P4-201ENST00000404096 329 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 Z86062.1-201ENST00000406773 777 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 SNORA77.2-201ENST00000408571 112 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 RPS15AP30-201ENST00000420976 390 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 GAPDHP75-201ENST00000433910 943 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AL731534.1-201ENST00000434711 269 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 RPL12P11-201ENST00000439970 501 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 MTND6P5-201ENST00000448266 512 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AC018635.1-201ENST00000468292 1030 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AC128716.1-201ENST00000475129 166 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.73□□□□□ -1.33
HPS3Q969F9 RPS26P24-201ENST00000497656 331 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.73□□□□□ -1.33
HPS3Q969F9 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 RN7SKP35-201ENST00000517210 151 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 IGKV2-4-201ENST00000523070 340 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.73□□□□□ -1.33
HPS3Q969F9 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.73□□□□□ -1.33
HPS3Q969F9 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC133794.1-201ENST00000602731 914 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC009269.6-201ENST00000621778 588 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AL355480.1-201ENST00000629041 99 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 AL357140.4-201ENST00000636827 412 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 OR5AC4P-202ENST00000642086 985 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HPS3Q969F9 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 AC073365.1-203ENST00000641055 1992 ntBASIC6.73□□□□□ -1.33
HPS3Q969F9 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.73□□□□□ -1.33
HPS3Q969F9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HPS3Q969F9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HPS3Q969F9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HPS3Q969F9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC010132.2-201ENST00000295493 1043 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 SNORA21-201ENST00000362423 132 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HPS3Q969F9 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AL353692.2-201ENST00000407054 335 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms