Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZNF101P1-201ENST00000435701 1720 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC096921.2-201ENST00000561507 1916 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 RMRPP5-201ENST00000411156 267 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 PRUNEP1-201ENST00000425846 705 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AL445928.1-201ENST00000435545 222 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC022034.3-201ENST00000471393 478 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 RN7SL447P-201ENST00000494711 245 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 OR7H2P-201ENST00000513483 306 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 MIR5096-201ENST00000583713 70 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AL353763.2-201ENST00000623489 1903 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC008937.3-201ENST00000606813 1700 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AL353625.1-202ENST00000366273 571 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 RNU6-398P-201ENST00000384143 109 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 SNORA11F-201ENST00000408237 128 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 TRY2P-201ENST00000448860 689 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC021006.3-201ENST00000530771 192 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AL121579.2-201ENST00000555466 590 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 MIR4675-201ENST00000577898 77 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 MIR3160-1-201ENST00000577972 85 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 MIR4260-201ENST00000583107 67 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC012616.1-201ENST00000600294 197 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC095055.1-201ENST00000603472 1113 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC018628.1-201ENST00000624147 3819 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC105114.1-201ENST00000624795 1862 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 RPL23AP18-201ENST00000416139 468 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC073264.2-201ENST00000448886 166 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 SNORA70.11-201ENST00000515987 138 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 SNORA70.13-201ENST00000516116 138 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AC091193.1-201ENST00000604640 448 ntBASIC5.54□□□□□ -1.52
RIF1Q5UIP0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.54□□□□□ -1.52
RIF1Q5UIP0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms