Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL512329.2-201ENST00000607350 548 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 AC062029.1-202ENST00000606164 3651 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 AC093829.1-201ENST00000506662 1618 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.61□□□□□ -1.35
CCNA1P78396 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 AC007342.5-201ENST00000571340 2142 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 MIR223-201ENST00000385204 110 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 PTMAP6-201ENST00000439110 327 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 RNA5SP92-201ENST00000516437 110 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.61□□□□□ -1.35
CCNA1P78396 CDC42P3-201ENST00000518493 633 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.61□□□□□ -1.35
CCNA1P78396 HAUS8P1-201ENST00000549005 542 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.61□□□□□ -1.35
CCNA1P78396 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.61□□□□□ -1.35
CCNA1P78396 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CCNA1P78396 SUGT1P3-202ENST00000604259 383 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 AL359513.1-201ENST00000614364 557 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AC090607.5-201ENST00000615692 224 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AC118658.2-201ENST00000618697 459 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AF117829.2-201ENST00000619538 361 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 SAMMSON-209ENST00000641222 1100 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.61□□□□□ -1.35
CCNA1P78396 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCNA1P78396 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.61□□□□□ -1.35
CCNA1P78396 MRRFP1-201ENST00000435941 1675 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.61□□□□□ -1.35
CCNA1P78396 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 AC140479.2-201ENST00000421567 3130 ntBASIC6.61□□□□□ -1.35
CCNA1P78396 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCNA1P78396 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCNA1P78396 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.6□□□□□ -1.35
CCNA1P78396 AL162456.1-201ENST00000634535 2006 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCNA1P78396 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.6□□□□□ -1.35
CCNA1P78396 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCNA1P78396 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.6□□□□□ -1.35
CCNA1P78396 RNU4-2-201ENST00000365668 141 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CCNA1P78396 LDHAP2-201ENST00000437325 985 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 RN7SL727P-201ENST00000482164 296 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.6□□□□□ -1.35
CCNA1P78396 RPS23P1-201ENST00000491662 432 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.6□□□□□ -1.35
CCNA1P78396 AC139365.2-201ENST00000517972 253 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.6□□□□□ -1.35
CCNA1P78396 AC027667.1-201ENST00000545814 304 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.6□□□□□ -1.35
CCNA1P78396 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.6□□□□□ -1.35
CCNA1P78396 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.6□□□□□ -1.35
CCNA1P78396 AL683813.2-201ENST00000605245 502 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 AC004890.3-201ENST00000605566 1095 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 AC004948.1-201ENST00000609858 672 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 AL137246.2-201ENST00000613439 662 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 MIR7155-201ENST00000615925 56 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCNA1P78396 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.6□□□□□ -1.35
CCNA1P78396 AC012078.1-201ENST00000405035 1646 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCNA1P78396 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCNA1P78396 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.6□□□□□ -1.35
CCNA1P78396 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.6□□□□□ -1.35
CCNA1P78396 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms