Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RPSAP75-201ENST00000605848 301 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 AL021368.3-201ENST00000607119 578 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 AC090912.3-201ENST00000609775 533 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A1P61619 uc_338.31-201ENST00000615595 186 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 AL590410.1-201ENST00000617925 333 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A1P61619 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
SEC61A1P61619 AC116667.2-201ENST00000641075 823 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A1P61619 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A1P61619 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A1P61619 AL137141.1-201ENST00000624622 4836 ntBASIC5.34□□□□□ -1.55
SEC61A1P61619 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.34□□□□□ -1.56
SEC61A1P61619 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SEC61A1P61619 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.34□□□□□ -1.56
SEC61A1P61619 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SEC61A1P61619 AC022325.1-201ENST00000502748 2199 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 OR56A4-201ENST00000330728 1209 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 SNORD1C-201ENST00000363315 78 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 SNORA27.3-201ENST00000364937 134 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 RNU11-6P-201ENST00000391127 133 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AL157702.1-201ENST00000398764 426 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 CCNB2P1-201ENST00000399411 1150 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL356057.1-202ENST00000402263 756 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 VN1R12P-201ENST00000403778 876 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A1P61619 RNA5SP198-201ENST00000410376 127 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AC073464.3-201ENST00000422564 712 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AC108479.1-201ENST00000431142 427 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 GAPDHP34-201ENST00000432112 823 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 MTCYBP15-201ENST00000433123 1127 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AL138899.2-201ENST00000439139 499 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL606517.1-201ENST00000446914 387 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A1P61619 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 HMGN1P5-201ENST00000448591 263 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A1P61619 VPS25P1-201ENST00000455691 508 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 RN7SL362P-201ENST00000494228 267 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 ZNF519P4-201ENST00000514008 125 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 RNU6-1334P-201ENST00000516032 105 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AC026407.1-201ENST00000518369 204 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AC011853.1-201ENST00000518911 454 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 BCAS2P1-201ENST00000528022 632 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AC068339.2-201ENST00000534395 618 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AL121594.4-201ENST00000556211 1196 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AL158050.2-201ENST00000605336 568 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A1P61619 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AC026367.3-201ENST00000619032 590 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL445493.3-201ENST00000619568 477 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AL591926.1-201ENST00000620542 217 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 LINC00216-201ENST00000623548 1126 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AP003485.1-201ENST00000625093 753 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AC097655.1-201ENST00000635075 318 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEC61A1P61619 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A1P61619 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A1P61619 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
SEC61A1P61619 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A1P61619 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A1P61619 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SEC61A1P61619 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A1P61619 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.32□□□□□ -1.56
SEC61A1P61619 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SEC61A1P61619 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
SEC61A1P61619 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.32□□□□□ -1.56
SEC61A1P61619 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A1P61619 ADAM24P-201ENST00000398655 2101 ntBASIC5.32□□□□□ -1.56
SEC61A1P61619 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A1P61619 CCNT2P1-201ENST00000423082 1315 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 3145.6 ms