Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPS3AP61247 AC003973.3-201ENST00000624863 2822 ntBASIC5.76□□□□□ -1.49
RPS3AP61247 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPS3AP61247 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPS3AP61247 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.76□□□□□ -1.49
RPS3AP61247 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPS3AP61247 AL353743.3-201ENST00000442109 1468 ntBASIC5.76□□□□□ -1.49
RPS3AP61247 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.76□□□□□ -1.49
RPS3AP61247 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPS3AP61247 MRRFP1-201ENST00000435941 1675 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC132825.1-201ENST00000463573 2247 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 RPL11P4-201ENST00000332269 436 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RNA5SP77-201ENST00000365394 120 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 RNU6-1320P-201ENST00000390838 107 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RNU6-1269P-201ENST00000391139 107 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 GAPDHP15-201ENST00000398586 975 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC007562.1-201ENST00000421819 517 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 MTND4P24-201ENST00000424002 397 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 VN1R20P-201ENST00000425215 966 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC099782.1-201ENST00000425889 474 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 ZNF965P-201ENST00000432501 817 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC023274.2-201ENST00000445264 521 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 RNU6-599P-201ENST00000459383 107 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RNU6-1193P-201ENST00000459461 107 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RN7SL643P-201ENST00000471845 291 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RN7SL714P-201ENST00000487050 298 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AL035690.1-201ENST00000490892 383 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RN7SL362P-201ENST00000494228 267 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 OR9N1P-202ENST00000494289 481 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 HMGB1P3-201ENST00000502802 616 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC021146.7-201ENST00000509604 775 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC108103.1-201ENST00000511286 446 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 COX6B1P4-201ENST00000519826 484 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 IGHV4-55-201ENST00000520889 368 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.75□□□□□ -1.49
RPS3AP61247 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.75□□□□□ -1.49
RPS3AP61247 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 CKS1BP1-201ENST00000555221 240 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.75□□□□□ -1.49
RPS3AP61247 AC090651.1-201ENST00000567865 634 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 GLYATL1P2-202ENST00000588046 902 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 SNX6P1-201ENST00000601728 1224 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AL359091.2-201ENST00000609303 556 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 MIR6780B-201ENST00000610307 79 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC004241.3-201ENST00000611728 517 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 uc_338.29-201ENST00000615099 168 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.75□□□□□ -1.49
RPS3AP61247 RNU6-368P-201ENST00000620928 107 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 RNU6-538P-201ENST00000622329 107 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 CASC19-274ENST00000642018 970 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 OR9K1P-202ENST00000641111 3217 ntBASIC5.75□□□□□ -1.49
RPS3AP61247 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.75□□□□□ -1.49
RPS3AP61247 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPS3AP61247 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPS3AP61247 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPS3AP61247 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.74□□□□□ -1.49
RPS3AP61247 CASC19-246ENST00000641625 1606 ntBASIC5.74□□□□□ -1.49
RPS3AP61247 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPS3AP61247 AC020656.2-201ENST00000613291 5309 ntBASIC5.74□□□□□ -1.49
RPS3AP61247 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPS3AP61247 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPS3AP61247 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RPS3AP61247 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RPS3AP61247 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPS3AP61247 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.74□□□□□ -1.49
RPS3AP61247 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.74□□□□□ -1.49
RPS3AP61247 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.74□□□□□ -1.49
RPS3AP61247 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.74□□□□□ -1.49
RPS3AP61247 RN7SKP86-201ENST00000410454 332 ntBASIC5.74□□□□□ -1.49
RPS3AP61247 U3.43-201ENST00000410734 213 ntBASIC5.74□□□□□ -1.49
RPS3AP61247 RANP4-201ENST00000413361 655 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms