Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC023813.2-201ENST00000564321 469 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.85□□□□□ -1.47
CLRN1P58418 GARSP1-201ENST00000570895 719 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 RN7SL208P-201ENST00000577964 296 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.85□□□□□ -1.47
CLRN1P58418 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 MTND3P19-201ENST00000603825 345 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 MRPL57P1-201ENST00000621486 265 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC092159.4-201ENST00000624944 550 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 AL121936.2-201ENST00000641935 662 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC005332.9-201ENST00000620266 2921 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CLRN1P58418 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.85□□□□□ -1.47
CLRN1P58418 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 AC241584.2-201ENST00000637142 2090 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 NXF4-202ENST00000416098 1465 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RBPJP6-201ENST00000411556 1431 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC104454.1-201ENST00000421341 1401 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 KYNUP2-201ENST00000582280 1329 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLRN1P58418 OR13C3-201ENST00000374781 1108 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 AL050335.1-201ENST00000396909 869 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL590635.1-201ENST00000406314 586 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 FCF1P5-201ENST00000406490 482 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL023284.3-201ENST00000407767 334 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RN7SKP182-201ENST00000410772 298 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 RPS21P8-201ENST00000413365 247 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RANP6-201ENST00000413691 644 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 AC023128.2-201ENST00000420880 1223 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 PTPN2P1-201ENST00000423212 1072 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RPS4XP16-201ENST00000427198 791 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 NANOGP2-201ENST00000435391 727 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 GAPDHP33-201ENST00000443168 1013 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 MRPL35P2-201ENST00000448009 511 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 USP9YP25-201ENST00000457708 443 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 MTND2P14-201ENST00000482139 351 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC022415.1-202ENST00000486612 523 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RN7SL350P-201ENST00000492591 299 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC091965.3-201ENST00000506236 208 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 UGT2A3P7-201ENST00000510485 734 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 RN7SKP196-201ENST00000516267 345 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 AP000926.4-201ENST00000527351 454 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.84□□□□□ -1.47
CLRN1P58418 GCSHP4-201ENST00000538792 439 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.84□□□□□ -1.47
CLRN1P58418 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 AP005136.2-201ENST00000583253 1049 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.84□□□□□ -1.47
CLRN1P58418 AC068790.2-201ENST00000602601 557 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.84□□□□□ -1.47
CLRN1P58418 AC012175.1-201ENST00000603755 531 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL138478.1-201ENST00000612252 832 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AP001264.1-201ENST00000620602 703 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC131159.1-201ENST00000621854 213 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AP000676.3-201ENST00000623299 569 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AC098679.4-201ENST00000624241 654 ntBASIC5.84□□□□□ -1.47
CLRN1P58418 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLRN1P58418 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
CLRN1P58418 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLRN1P58418 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLRN1P58418 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms