Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL645927.1-201ENST00000396783 406 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 RNA5SP251-201ENST00000410614 137 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 RN7SKP273-201ENST00000411392 314 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 TMA16P2-201ENST00000413187 601 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 RPS17P17-201ENST00000419392 409 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 SDC4P-201ENST00000453285 601 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN6P56747 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN6P56747 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN6P56747 AC009120.1-201ENST00000493458 473 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN6P56747 AP001804.1-201ENST00000526868 919 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN6P56747 DPPA3P2-202ENST00000557188 1219 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CLDN6P56747 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN6P56747 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN6P56747 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 MIR8080-201ENST00000622224 89 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 AL390318.1-201ENST00000624564 687 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
CLDN6P56747 CASC19-264ENST00000641912 1184 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLDN6P56747 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 AC068769.1-201ENST00000474767 2426 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLDN6P56747 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CLDN6P56747 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN6P56747 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN6P56747 SNX18P3-202ENST00000565670 1750 ntBASIC5.6□□□□□ -1.51
CLDN6P56747 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN6P56747 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLDN6P56747 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN6P56747 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN6P56747 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN6P56747 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN6P56747 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN6P56747 RN7SKP115-201ENST00000363177 317 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN6P56747 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 OR5W1P-201ENST00000423705 938 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 H3F3BP1-201ENST00000440551 403 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 CNOT7P2-201ENST00000441051 832 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 RN7SL860P-201ENST00000473738 223 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 CBX1P5-201ENST00000475330 559 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 AC004453.1-201ENST00000487895 408 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 AC231760.1-201ENST00000498002 260 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 AC024558.1-201ENST00000505008 528 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN6P56747 AC004825.1-201ENST00000555068 586 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN6P56747 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 AL161912.4-201ENST00000623889 2468 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN6P56747 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN6P56747 USP9YP3-201ENST00000434481 1766 ntBASIC5.59□□□□□ -1.51
CLDN6P56747 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN6P56747 HSPD1P8-201ENST00000400121 1658 ntBASIC5.59□□□□□ -1.52
CLDN6P56747 IMMTP1-201ENST00000435590 2219 ntBASIC5.59□□□□□ -1.52
CLDN6P56747 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN6P56747 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN6P56747 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
CLDN6P56747 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN6P56747 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN6P56747 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms