Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 RPS27AP11-201ENST00000402798 447 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC233289.1-201ENST00000403700 508 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 RN7SKP281-201ENST00000410472 352 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 U3.43-201ENST00000410734 213 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 RNA5SP498-201ENST00000411342 120 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 HMGB3P31-201ENST00000413333 595 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.84□□□□□ -1.47
SUMO3P55854 RPL21P50-201ENST00000417698 477 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 USP9YP21-201ENST00000420603 432 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC064862.5-201ENST00000440618 334 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 ELOCP13-201ENST00000443934 329 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 MTND1P33-201ENST00000446251 917 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 RPL7L1P3-201ENST00000455249 689 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC091544.1-201ENST00000484702 348 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.84□□□□□ -1.47
SUMO3P55854 RPS27AP16-201ENST00000492222 470 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 NPM1P27-201ENST00000502784 830 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 MRPL57P6-201ENST00000506570 309 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC108103.1-201ENST00000511286 446 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 MRPS5P3-201ENST00000515577 166 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 IGHV4-55-201ENST00000520889 368 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.84□□□□□ -1.47
SUMO3P55854 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.84□□□□□ -1.47
SUMO3P55854 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 AC011472.4-201ENST00000615848 491 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC011815.3-201ENST00000624194 473 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AC103703.1-201ENST00000634783 663 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.84□□□□□ -1.47
SUMO3P55854 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
SUMO3P55854 AC007114.2-201ENST00000576014 4281 ntBASIC5.84□□□□□ -1.48
SUMO3P55854 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 IMMTP1-201ENST00000435590 2219 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.83□□□□□ -1.48
SUMO3P55854 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.83□□□□□ -1.48
SUMO3P55854 FBXL21-201ENST00000297158 1305 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SUMO3P55854 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SUMO3P55854 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 RNA5SP485-201ENST00000365053 119 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 RNU6-532P-201ENST00000384318 107 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 AL034374.1-201ENST00000406329 351 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 RN7SKP129-201ENST00000410288 299 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 OSTCP5-201ENST00000425293 453 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.83□□□□□ -1.48
SUMO3P55854 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.83□□□□□ -1.48
SUMO3P55854 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 EMC3-AS1-205ENST00000438698 534 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.83□□□□□ -1.48
SUMO3P55854 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 MTND2P8-201ENST00000450555 1025 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 SNORD11.1-201ENST00000459482 85 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 RN7SL643P-201ENST00000471845 291 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 RPS4XP6-201ENST00000477670 797 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 AC093664.1-201ENST00000511779 289 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 CYCSP25-201ENST00000525280 316 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms