Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK1P53667 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 AC116036.1-201ENST00000412199 367 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 OR2AT2P-201ENST00000413438 905 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK1P53667 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK1P53667 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK1P53667 BX679664.2-201ENST00000439282 283 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK1P53667 DEFB109A-201ENST00000482450 265 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 AC147055.1-201ENST00000509261 750 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK1P53667 AC106800.3-201ENST00000511389 308 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.03□□□□□ -1.44
LIMK1P53667 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK1P53667 PCNAP4-201ENST00000532690 730 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 AC025423.2-201ENST00000537570 439 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK1P53667 MTATP6P25-201ENST00000574491 261 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 AP000919.1-201ENST00000582850 985 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 IMMP1LP3-201ENST00000604197 224 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 AL591167.1-201ENST00000607321 456 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK1P53667 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK1P53667 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
LIMK1P53667 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
LIMK1P53667 AC024651.2-201ENST00000562480 2098 ntBASIC6.03□□□□□ -1.44
LIMK1P53667 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LIMK1P53667 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 C4BPAP1-201ENST00000415474 1893 ntBASIC6.02□□□□□ -1.44
LIMK1P53667 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
LIMK1P53667 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.02□□□□□ -1.45
LIMK1P53667 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 AL355834.1-201ENST00000556602 3965 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LIMK1P53667 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LIMK1P53667 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LIMK1P53667 RNU6-249P-201ENST00000363016 102 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 SNORD8-201ENST00000363915 110 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LIMK1P53667 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LIMK1P53667 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.02□□□□□ -1.45
LIMK1P53667 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.02□□□□□ -1.45
LIMK1P53667 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.02□□□□□ -1.45
LIMK1P53667 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.02□□□□□ -1.45
LIMK1P53667 OR52Y1P-201ENST00000452418 828 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 RN7SL727P-201ENST00000482164 296 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 AC022415.1-202ENST00000486612 523 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 MORF4L2P1-201ENST00000503761 858 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 NDUFA5P12-201ENST00000503796 343 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.02□□□□□ -1.45
LIMK1P53667 AP002981.1-201ENST00000517692 975 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 AP000859.1-201ENST00000525536 307 ntBASIC6.02□□□□□ -1.45
LIMK1P53667 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.02□□□□□ -1.45
LIMK1P53667 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.02□□□□□ -1.45
LIMK1P53667 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
LIMK1P53667 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LIMK1P53667 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.02□□□□□ -1.45
LIMK1P53667 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LIMK1P53667 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LIMK1P53667 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LIMK1P53667 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.02□□□□□ -1.45
LIMK1P53667 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LIMK1P53667 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LIMK1P53667 AC022325.1-201ENST00000502748 2199 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 LINC01963-201ENST00000562038 3148 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIMK1P53667 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIMK1P53667 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 AL353763.1-201ENST00000624467 1628 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIMK1P53667 SNORA64.1-201ENST00000362600 132 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 RNU1-59P-201ENST00000364829 162 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
LIMK1P53667 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
LIMK1P53667 AC240504.1-201ENST00000395709 845 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms