Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC123769.1-201ENST00000530992 3192 ntBASIC5.85□□□□□ -1.47
CLCNKAP51800 AC027279.1-201ENST00000568885 4284 ntBASIC5.85□□□□□ -1.47
CLCNKAP51800 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 AL591135.1-201ENST00000401578 5914 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCNKAP51800 PROS2P-201ENST00000474651 1951 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 CASC19-255ENST00000641733 1385 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLCNKAP51800 RNA5SP211-201ENST00000365516 117 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 SNORA11.3-201ENST00000408471 128 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AC015977.1-201ENST00000418887 292 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCNKAP51800 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AC021876.1-201ENST00000425959 359 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCNKAP51800 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.84□□□□□ -1.47
CLCNKAP51800 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AL731534.1-201ENST00000434711 269 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 ACA64.4-201ENST00000459070 127 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 HMGN1P8-201ENST00000463578 288 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AL035690.1-201ENST00000490892 383 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AC008945.1-201ENST00000505144 499 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AC114781.3-201ENST00000512083 142 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCNKAP51800 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AC008126.1-201ENST00000549019 480 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 AC100767.2-201ENST00000604840 693 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.84□□□□□ -1.47
CLCNKAP51800 SNORA11.6-201ENST00000619030 128 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 AP001962.1-201ENST00000624114 559 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCNKAP51800 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 AC020633.1-201ENST00000468439 2247 ntBASIC5.84□□□□□ -1.47
CLCNKAP51800 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCNKAP51800 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLCNKAP51800 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CLCNKAP51800 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLCNKAP51800 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLCNKAP51800 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CLCNKAP51800 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CLCNKAP51800 AC020656.2-201ENST00000613291 5309 ntBASIC5.84□□□□□ -1.48
CLCNKAP51800 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CLCNKAP51800 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.83□□□□□ -1.48
CLCNKAP51800 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.83□□□□□ -1.48
CLCNKAP51800 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.83□□□□□ -1.48
CLCNKAP51800 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLCNKAP51800 GTF2IP4-201ENST00000453092 2054 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLCNKAP51800 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CLCNKAP51800 OR7E101P-201ENST00000400428 513 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 LYPLA1P3-201ENST00000402650 695 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 DPPA2P2-201ENST00000418220 897 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC099677.3-201ENST00000427081 395 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.83□□□□□ -1.48
CLCNKAP51800 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 AL162739.1-201ENST00000450606 307 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AC016724.1-201ENST00000453215 421 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 RN7SKP5-201ENST00000517045 272 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AC026688.1-201ENST00000520639 1168 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC125494.2-201ENST00000602431 657 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AC145423.1-201ENST00000605712 336 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AL356094.1-201ENST00000624663 1212 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.83□□□□□ -1.48
CLCNKAP51800 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms