Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 SNRPEP6-201ENST00000407465 277 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 AC002524.1-201ENST00000411687 547 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.8□□□□□ -1.48
HNF4AP41235 NMD3P2-201ENST00000421815 761 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.8□□□□□ -1.48
HNF4AP41235 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.8□□□□□ -1.48
HNF4AP41235 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.8□□□□□ -1.48
HNF4AP41235 FTLP8-201ENST00000446770 267 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 ACA64.4-201ENST00000459070 127 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 RN7SL168P-201ENST00000463821 279 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 PSMA2P2-201ENST00000504319 686 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.8□□□□□ -1.48
HNF4AP41235 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.8□□□□□ -1.48
HNF4AP41235 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.8□□□□□ -1.48
HNF4AP41235 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HNF4AP41235 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 FAM60CP-201ENST00000591086 664 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 AL592494.3-201ENST00000609485 464 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 uc_338.26-201ENST00000612659 160 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.8□□□□□ -1.48
HNF4AP41235 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.8□□□□□ -1.48
HNF4AP41235 AL355974.3-201ENST00000617383 467 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.8□□□□□ -1.48
HNF4AP41235 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.8□□□□□ -1.48
HNF4AP41235 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HNF4AP41235 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
HNF4AP41235 LINC02019-201ENST00000608605 2060 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 PSG10P-201ENST00000501199 1500 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HNF4AP41235 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
HNF4AP41235 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
HNF4AP41235 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HNF4AP41235 AC003973.3-201ENST00000624863 2822 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.79□□□□□ -1.48
HNF4AP41235 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HNF4AP41235 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HNF4AP41235 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HNF4AP41235 AC104297.1-201ENST00000393779 870 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.79□□□□□ -1.48
HNF4AP41235 RNA5SP431-201ENST00000410312 120 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AC245096.1-201ENST00000413104 546 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 AMYP1-201ENST00000440059 1023 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 SDC4P-201ENST00000453285 601 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 HSPE1P22-201ENST00000456856 327 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.79□□□□□ -1.48
HNF4AP41235 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 RNA5SP473-201ENST00000516402 125 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 RN7SKP238-201ENST00000516483 249 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 AC008676.3-201ENST00000521237 435 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.79□□□□□ -1.48
HNF4AP41235 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.79□□□□□ -1.48
HNF4AP41235 AC002519.2-203ENST00000567043 837 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 AC004241.3-201ENST00000611728 517 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AC107905.1-201ENST00000616204 426 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AC004801.6-201ENST00000616571 978 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AL590410.1-201ENST00000617925 333 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AL357562.1-201ENST00000624911 609 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AP001052.1-201ENST00000626421 99 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 AL355834.1-201ENST00000556602 3965 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HNF4AP41235 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 RBMY1HP-201ENST00000382759 1389 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 AL354854.1-201ENST00000455940 1363 ntBASIC5.79□□□□□ -1.48
HNF4AP41235 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HNF4AP41235 AC104966.1-201ENST00000467010 1464 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.78□□□□□ -1.48
HNF4AP41235 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HNF4AP41235 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HNF4AP41235 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms