Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RNA5SP473-201ENST00000516402 125 ntBASIC6.2□□□□□ -1.42
RFC1P35251 RNU6-467P-201ENST00000517027 110 ntBASIC6.2□□□□□ -1.42
RFC1P35251 RNA5SP340-201ENST00000517132 107 ntBASIC6.2□□□□□ -1.42
RFC1P35251 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC1P35251 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC1P35251 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC1P35251 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC1P35251 OR4A42P-201ENST00000531397 938 ntBASIC6.2□□□□□ -1.42
RFC1P35251 AC024405.1-201ENST00000532521 1042 ntBASIC6.2□□□□□ -1.42
RFC1P35251 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC1P35251 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 RPA2P1-201ENST00000556557 721 ntBASIC6.2□□□□□ -1.42
RFC1P35251 AC107958.1-201ENST00000556576 290 ntBASIC6.2□□□□□ -1.42
RFC1P35251 TXNP4-201ENST00000575018 310 ntBASIC6.2□□□□□ -1.42
RFC1P35251 AC005244.1-201ENST00000582566 339 ntBASIC6.2□□□□□ -1.42
RFC1P35251 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.2□□□□□ -1.42
RFC1P35251 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.2□□□□□ -1.42
RFC1P35251 AL583832.1-201ENST00000603227 784 ntBASIC6.2□□□□□ -1.42
RFC1P35251 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC1P35251 AC091948.2-201ENST00000636510 279 ntBASIC6.2□□□□□ -1.42
RFC1P35251 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RFC1P35251 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.2□□□□□ -1.42
RFC1P35251 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 AL592429.1-201ENST00000403909 1473 ntBASIC6.2□□□□□ -1.42
RFC1P35251 CR382285.2-201ENST00000624662 1495 ntBASIC6.2□□□□□ -1.42
RFC1P35251 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC1P35251 LYARP1-201ENST00000436977 1501 ntBASIC6.2□□□□□ -1.42
RFC1P35251 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
RFC1P35251 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
RFC1P35251 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFC1P35251 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFC1P35251 OR5W1P-201ENST00000423705 938 ntBASIC6.19□□□□□ -1.42
RFC1P35251 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.19□□□□□ -1.42
RFC1P35251 CFL1P4-201ENST00000451536 498 ntBASIC6.19□□□□□ -1.42
RFC1P35251 GEMIN2P1-201ENST00000454246 752 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC019084.1-201ENST00000457337 432 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 AC078899.1-201ENST00000521432 1185 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC130364.2-201ENST00000528639 604 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC090424.1-201ENST00000535243 736 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC1P35251 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 NPM1P42-201ENST00000560329 862 ntBASIC6.19□□□□□ -1.42
RFC1P35251 GARSP1-201ENST00000570895 719 ntBASIC6.19□□□□□ -1.42
RFC1P35251 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 AC090079.2-201ENST00000575289 768 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 AC008507.3-201ENST00000585753 472 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 ADAD1P2-201ENST00000588476 646 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.19□□□□□ -1.42
RFC1P35251 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 AC092474.3-201ENST00000603022 568 ntBASIC6.19□□□□□ -1.42
RFC1P35251 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC1P35251 AC108673.3-201ENST00000609183 335 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AL356752.1-201ENST00000615844 593 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AL445670.1-201ENST00000618889 801 ntBASIC6.19□□□□□ -1.42
RFC1P35251 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 AL391262.2-201ENST00000622466 494 ntBASIC6.19□□□□□ -1.42
RFC1P35251 AC073592.6-201ENST00000624271 415 ntBASIC6.19□□□□□ -1.42
RFC1P35251 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC1P35251 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC1P35251 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 AL031595.2-201ENST00000624215 19071 ntBASIC6.19□□□□□ -1.42
RFC1P35251 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC1P35251 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC1P35251 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFC1P35251 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC1P35251 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.18□□□□□ -1.42
RFC1P35251 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC1P35251 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.18□□□□□ -1.42
RFC1P35251 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RFC1P35251 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC1P35251 AL589994.1-201ENST00000404962 340 ntBASIC6.18□□□□□ -1.42
RFC1P35251 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.18□□□□□ -1.42
RFC1P35251 SETP10-201ENST00000424368 814 ntBASIC6.18□□□□□ -1.42
RFC1P35251 EIF2S2P3-201ENST00000428356 999 ntBASIC6.18□□□□□ -1.42
RFC1P35251 RPL12P16-201ENST00000431098 498 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms