Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.22□□□□□ -1.09
RXRBP28702 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 RPS29P22-201ENST00000472363 168 ntBASIC8.22□□□□□ -1.09
RXRBP28702 RPL7P6-201ENST00000480903 738 ntBASIC8.22□□□□□ -1.09
RXRBP28702 RN7SL97P-201ENST00000486780 299 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC8.22□□□□□ -1.09
RXRBP28702 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 AC021193.1-201ENST00000511607 420 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC8.22□□□□□ -1.09
RXRBP28702 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 AP004607.2-201ENST00000533949 322 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 AL049874.4-201ENST00000557593 255 ntBASIC8.22□□□□□ -1.09
RXRBP28702 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 BUB1P1-201ENST00000603541 607 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC113368.1-201ENST00000603736 382 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC133644.2-201ENST00000608142 540 ntBASIC8.22□□□□□ -1.09
RXRBP28702 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.22□□□□□ -1.09
RXRBP28702 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC078880.5-201ENST00000617845 421 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC8.22□□□□□ -1.09
RXRBP28702 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 CDY5P-201ENST00000411487 1580 ntBASIC8.22□□□□□ -1.09
RXRBP28702 CDY9P-201ENST00000451397 1580 ntBASIC8.22□□□□□ -1.09
RXRBP28702 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
RXRBP28702 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 AL031123.3-201ENST00000623345 1837 ntBASIC8.22□□□□□ -1.09
RXRBP28702 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 MTND4P8-201ENST00000514997 1362 ntBASIC8.22□□□□□ -1.09
RXRBP28702 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.21□□□□□ -1.09
RXRBP28702 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
RXRBP28702 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RXRBP28702 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 OR5H2-201ENST00000355273 945 ntBASIC8.21□□□□□ -1.1
RXRBP28702 MIR1302-8-201ENST00000408342 128 ntBASIC8.21□□□□□ -1.1
RXRBP28702 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 AL512504.1-201ENST00000415494 778 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.21□□□□□ -1.1
RXRBP28702 AL121882.1-201ENST00000422893 417 ntBASIC8.21□□□□□ -1.1
RXRBP28702 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC8.21□□□□□ -1.1
RXRBP28702 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 AL353706.1-201ENST00000436728 494 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC006466.1-201ENST00000438721 289 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 AC079841.1-201ENST00000481228 950 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC010486.2-201ENST00000505572 483 ntBASIC8.21□□□□□ -1.1
RXRBP28702 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 Y_RNA.710-201ENST00000516975 110 ntBASIC8.21□□□□□ -1.1
RXRBP28702 RNU6-334P-201ENST00000517072 102 ntBASIC8.21□□□□□ -1.1
RXRBP28702 SNORA43.3-201ENST00000517240 103 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AP003355.1-201ENST00000518956 587 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC8.21□□□□□ -1.1
RXRBP28702 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 AGGF1P8-201ENST00000562979 1000 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 AL591167.1-201ENST00000607321 456 ntBASIC8.21□□□□□ -1.1
RXRBP28702 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 uc_338.18-201ENST00000615451 175 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC245389.2-201ENST00000616023 576 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AC242843.1-201ENST00000618702 573 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AL445528.2-201ENST00000620582 470 ntBASIC8.21□□□□□ -1.1
RXRBP28702 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.21□□□□□ -1.1
RXRBP28702 AC083865.1-201ENST00000636634 831 ntBASIC8.21□□□□□ -1.1
RXRBP28702 AL034408.1-201ENST00000637712 664 ntBASIC8.21□□□□□ -1.1
RXRBP28702 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
RXRBP28702 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 MTND4P26-201ENST00000415971 1359 ntBASIC8.21□□□□□ -1.1
RXRBP28702 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RXRBP28702 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RXRBP28702 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms