Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNRPCP6-201ENST00000528310 210 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC037479.1-201ENST00000558361 625 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC021749.1-201ENST00000604322 607 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL583856.2-201ENST00000606298 543 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.84□□□□□ -1.15
ERCC3P19447 FRG1HP-204ENST00000617940 757 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL121594.5-201ENST00000631724 573 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 LINC02211-204ENST00000642024 1070 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 AC004014.2-201ENST00000623718 5122 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
ERCC3P19447 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
ERCC3P19447 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
ERCC3P19447 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.83□□□□□ -1.16
ERCC3P19447 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
ERCC3P19447 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 SNORD116-8-201ENST00000384365 95 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 RNA5SP474-201ENST00000391234 90 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 MTCO1P56-201ENST00000401674 224 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 RN7SKP86-201ENST00000410454 332 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC013404.1-201ENST00000413068 249 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 LINC01881-201ENST00000416103 412 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 NME1P1-201ENST00000420914 382 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AL139158.1-201ENST00000424719 340 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC097359.1-201ENST00000447946 463 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.83□□□□□ -1.16
ERCC3P19447 NPM1P13-201ENST00000452663 865 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.83□□□□□ -1.16
ERCC3P19447 RNU7-140P-201ENST00000459546 60 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 RPL23AP44-201ENST00000482216 473 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 Y_RNA.688-201ENST00000516565 95 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC125611.1-201ENST00000549563 229 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.83□□□□□ -1.16
ERCC3P19447 OR11H3P-201ENST00000554547 982 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.83□□□□□ -1.16
ERCC3P19447 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 AP001542.2-201ENST00000593141 364 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC002069.2-201ENST00000603580 883 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC7.83□□□□□ -1.16
ERCC3P19447 AC011891.2-201ENST00000604949 397 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC016877.3-201ENST00000606778 504 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 AL162574.1-201ENST00000615702 950 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 AC139769.3-201ENST00000618383 175 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 OR1S1-201ENST00000624470 978 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 LINC01808-202ENST00000641680 1116 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 AC007993.1-201ENST00000621298 2430 ntBASIC7.83□□□□□ -1.16
ERCC3P19447 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.83□□□□□ -1.16
ERCC3P19447 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
ERCC3P19447 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ERCC3P19447 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
ERCC3P19447 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
ERCC3P19447 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms