Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL603755.1-201ENST00000619504 163 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 AC004836.1-201ENST00000623032 634 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC018659.2-201ENST00000624690 715 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 AC119674.1-213ENST00000641177 1386 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 KARSP1-201ENST00000451871 1752 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AC006511.3-201ENST00000624929 1783 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 NXF4-202ENST00000416098 1465 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL6A2P12110 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 SNORD8-201ENST00000363915 110 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 RN7SKP189-201ENST00000365042 330 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 Y_RNA.472-201ENST00000384322 102 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 UBBP1-201ENST00000392399 473 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LDHAP5-201ENST00000394996 622 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 MTCO1P56-201ENST00000401674 224 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AL078595.1-201ENST00000404458 226 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 RNU4-74P-201ENST00000411280 161 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.54□□□□□ -1.36
COL6A2P12110 RPLP1P10-201ENST00000413972 339 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 RPS26P13-201ENST00000419030 330 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AC005189.1-201ENST00000431286 310 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 PSMD8P1-201ENST00000436275 769 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 DNAJA1P5-201ENST00000440278 943 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AL353898.1-201ENST00000444055 238 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.54□□□□□ -1.36
COL6A2P12110 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 RPSAP24-201ENST00000461543 873 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC106760.2-201ENST00000504159 619 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC074087.1-201ENST00000512059 724 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 RNU6-1129P-201ENST00000515964 104 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC107952.1-201ENST00000524200 376 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AP001994.1-201ENST00000527539 826 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC084824.1-201ENST00000550917 1005 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AL162632.2-201ENST00000553933 399 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC011193.2-201ENST00000582638 367 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 MIR5682-201ENST00000584864 76 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 MIR4428-201ENST00000584884 73 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 AL049840.5-201ENST00000602827 552 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 MTCO2P22-201ENST00000603246 681 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AC241377.1-201ENST00000619797 406 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 AC005753.1-201ENST00000623837 618 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL6A2P12110 IMMTP1-201ENST00000435590 2219 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
COL6A2P12110 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms