Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.32□□□□□ -1.4
COL11A1P12107 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 RNA5SP319-201ENST00000362768 119 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL11A1P12107 FAM96AP1-201ENST00000430879 482 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 H2AFZP6-201ENST00000444403 394 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 RN7SL51P-201ENST00000468230 285 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 RN7SL808P-201ENST00000496066 299 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.32□□□□□ -1.4
COL11A1P12107 OR5D15P-201ENST00000531671 942 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 AC027667.1-201ENST00000545814 304 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.32□□□□□ -1.4
COL11A1P12107 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.32□□□□□ -1.4
COL11A1P12107 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.32□□□□□ -1.4
COL11A1P12107 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.32□□□□□ -1.4
COL11A1P12107 AL139805.2-201ENST00000455305 2433 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.31□□□□□ -1.4
COL11A1P12107 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
COL11A1P12107 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 AC016251.2-201ENST00000623393 3089 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.31□□□□□ -1.4
COL11A1P12107 AC092070.2-203ENST00000598377 3644 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.31□□□□□ -1.4
COL11A1P12107 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL11A1P12107 RPL23AP18-201ENST00000416139 468 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 SLC35E1P1-201ENST00000419313 864 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.31□□□□□ -1.4
COL11A1P12107 VN1R21P-201ENST00000426703 765 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AL365220.1-201ENST00000432923 399 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.31□□□□□ -1.4
COL11A1P12107 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 RN7SL610P-201ENST00000463845 291 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AC024940.3-201ENST00000538551 316 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AL049779.2-201ENST00000553847 315 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
COL11A1P12107 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.31□□□□□ -1.4
COL11A1P12107 HIRAP1-201ENST00000605318 787 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AC118658.2-201ENST00000618697 459 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 AP001784.1-201ENST00000624107 428 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.31□□□□□ -1.4
COL11A1P12107 AC018809.2-201ENST00000602436 3823 ntBASIC6.31□□□□□ -1.4
COL11A1P12107 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
COL11A1P12107 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL11A1P12107 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.3□□□□□ -1.4
COL11A1P12107 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.3□□□□□ -1.4
COL11A1P12107 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 SRSF1P1-201ENST00000424058 520 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 AC092651.1-201ENST00000426110 312 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.3□□□□□ -1.4
COL11A1P12107 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.3□□□□□ -1.4
COL11A1P12107 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL11A1P12107 RN7SL591P-201ENST00000496150 292 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 AC092593.2-201ENST00000513866 913 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.3□□□□□ -1.4
COL11A1P12107 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.3□□□□□ -1.4
COL11A1P12107 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.3□□□□□ -1.4
COL11A1P12107 AC006115.2-201ENST00000596823 202 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.3□□□□□ -1.4
COL11A1P12107 NANOGP3-201ENST00000605855 286 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 SAMMSON-209ENST00000641222 1100 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 MAPK10-350ENST00000641777 965 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.3□□□□□ -1.4
COL11A1P12107 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
COL11A1P12107 AC068769.1-201ENST00000474767 2426 ntBASIC6.3□□□□□ -1.4
COL11A1P12107 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL11A1P12107 AC009804.1-201ENST00000400949 179 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms