Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC009963.4-201ENST00000448535 339 ntBASIC6□□□□□ -1.45
RETP07949 MORF4L1P4-201ENST00000450245 976 ntBASIC6□□□□□ -1.45
RETP07949 AC007386.1-201ENST00000455212 582 ntBASIC6□□□□□ -1.45
RETP07949 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6□□□□□ -1.45
RETP07949 RNA5SP92-201ENST00000516437 110 ntBASIC6□□□□□ -1.45
RETP07949 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6□□□□□ -1.45
RETP07949 IGBP1P1-201ENST00000554337 1009 ntBASIC6□□□□□ -1.45
RETP07949 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6□□□□□ -1.45
RETP07949 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 AC009120.3-201ENST00000563335 499 ntBASIC6□□□□□ -1.45
RETP07949 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RETP07949 AC024940.4-201ENST00000605507 246 ntBASIC6□□□□□ -1.45
RETP07949 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6□□□□□ -1.45
RETP07949 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6□□□□□ -1.45
RETP07949 AL357562.1-201ENST00000624911 609 ntBASIC6□□□□□ -1.45
RETP07949 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6□□□□□ -1.45
RETP07949 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
RETP07949 USP9YP3-201ENST00000434481 1766 ntBASIC6□□□□□ -1.45
RETP07949 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
RETP07949 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RETP07949 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.99□□□□□ -1.45
RETP07949 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RETP07949 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.99□□□□□ -1.45
RETP07949 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.99□□□□□ -1.45
RETP07949 AL137058.3-201ENST00000624531 3099 ntBASIC5.99□□□□□ -1.45
RETP07949 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 GNG5P2-201ENST00000372054 207 ntBASIC5.99□□□□□ -1.45
RETP07949 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RETP07949 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RETP07949 RNU11-6P-201ENST00000391127 133 ntBASIC5.99□□□□□ -1.45
RETP07949 AL645927.1-201ENST00000396783 406 ntBASIC5.99□□□□□ -1.45
RETP07949 RPL37P18-201ENST00000411602 243 ntBASIC5.99□□□□□ -1.45
RETP07949 AC021876.1-201ENST00000425959 359 ntBASIC5.99□□□□□ -1.45
RETP07949 AC127526.2-201ENST00000426436 775 ntBASIC5.99□□□□□ -1.45
RETP07949 FMO7P-201ENST00000436045 768 ntBASIC5.99□□□□□ -1.45
RETP07949 GAPDHP23-201ENST00000444823 993 ntBASIC5.99□□□□□ -1.45
RETP07949 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.99□□□□□ -1.45
RETP07949 RPS27AP3-201ENST00000453803 454 ntBASIC5.99□□□□□ -1.45
RETP07949 AC011225.1-201ENST00000457751 369 ntBASIC5.99□□□□□ -1.45
RETP07949 AC023245.1-201ENST00000468501 517 ntBASIC5.99□□□□□ -1.45
RETP07949 AC004815.1-201ENST00000484185 331 ntBASIC5.99□□□□□ -1.45
RETP07949 AL035690.1-201ENST00000490892 383 ntBASIC5.99□□□□□ -1.45
RETP07949 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.99□□□□□ -1.45
RETP07949 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.99□□□□□ -1.45
RETP07949 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.99□□□□□ -1.45
RETP07949 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.99□□□□□ -1.45
RETP07949 AC004825.1-201ENST00000555068 586 ntBASIC5.99□□□□□ -1.45
RETP07949 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.99□□□□□ -1.45
RETP07949 MIR3189-201ENST00000578735 73 ntBASIC5.99□□□□□ -1.45
RETP07949 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.99□□□□□ -1.45
RETP07949 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.99□□□□□ -1.45
RETP07949 AC096861.1-201ENST00000616652 240 ntBASIC5.99□□□□□ -1.45
RETP07949 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.99□□□□□ -1.45
RETP07949 CU639417.4-201ENST00000623928 207 ntBASIC5.99□□□□□ -1.45
RETP07949 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.99□□□□□ -1.45
RETP07949 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.99□□□□□ -1.45
RETP07949 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 AC005725.1-201ENST00000577346 2607 ntBASIC5.99□□□□□ -1.45
RETP07949 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RETP07949 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RETP07949 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.99□□□□□ -1.45
RETP07949 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.98□□□□□ -1.45
RETP07949 AC097063.1-201ENST00000426714 1797 ntBASIC5.98□□□□□ -1.45
RETP07949 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RETP07949 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.98□□□□□ -1.45
RETP07949 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RETP07949 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RETP07949 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RETP07949 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RETP07949 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.98□□□□□ -1.45
RETP07949 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.98□□□□□ -1.45
RETP07949 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RETP07949 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.98□□□□□ -1.45
RETP07949 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.98□□□□□ -1.45
RETP07949 AL662874.1-201ENST00000426065 230 ntBASIC5.98□□□□□ -1.45
RETP07949 AC016027.5-201ENST00000427227 210 ntBASIC5.98□□□□□ -1.45
RETP07949 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.98□□□□□ -1.45
RETP07949 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.98□□□□□ -1.45
RETP07949 EEF1B2P6-201ENST00000445713 673 ntBASIC5.98□□□□□ -1.45
RETP07949 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.98□□□□□ -1.45
RETP07949 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.98□□□□□ -1.45
RETP07949 AL445687.2-201ENST00000458156 728 ntBASIC5.98□□□□□ -1.45
RETP07949 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RETP07949 ASNSP4-201ENST00000511103 447 ntBASIC5.98□□□□□ -1.45
RETP07949 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms