Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1BO75841 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1BO75841 RN7SKP46-201ENST00000515942 234 ntBASIC4.82□□□□□ -1.64
UPK1BO75841 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.82□□□□□ -1.64
UPK1BO75841 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1BO75841 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
UPK1BO75841 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1BO75841 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 NIFKP4-201ENST00000567275 1192 ntBASIC4.82□□□□□ -1.64
UPK1BO75841 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1BO75841 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 AL137000.1-201ENST00000610528 1244 ntBASIC4.82□□□□□ -1.64
UPK1BO75841 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
UPK1BO75841 MIR7848-201ENST00000617402 101 ntBASIC4.82□□□□□ -1.64
UPK1BO75841 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1BO75841 HBG1-202ENST00000632727 369 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1BO75841 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.82□□□□□ -1.64
UPK1BO75841 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1BO75841 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1BO75841 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UPK1BO75841 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1BO75841 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
UPK1BO75841 AP001273.1-201ENST00000624493 3152 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 TUBBP10-201ENST00000427668 1301 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
UPK1BO75841 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 SNORA30B-201ENST00000365319 129 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 PCNAP3-201ENST00000397222 778 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 AL157702.1-201ENST00000398764 426 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 HIST1H2BPS2-201ENST00000402707 340 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 RN7SKP16-201ENST00000410180 299 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 RNU6-233P-201ENST00000410845 141 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 GTF3AP6-201ENST00000432585 986 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 BSNDP4-201ENST00000436076 388 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 RN7SL223P-201ENST00000470401 294 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 AC025271.1-201ENST00000485045 429 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 RN7SL104P-201ENST00000498686 293 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 SCARNA20.4-201ENST00000516969 131 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 AC090022.1-201ENST00000546569 311 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 AL132640.2-202ENST00000559732 614 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 MIR3689C-201ENST00000581239 72 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1BO75841 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 AL139099.4-201ENST00000614802 114 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 CLUHP10-201ENST00000631979 980 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1BO75841 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 AC018717.1-201ENST00000457712 1505 ntBASIC4.81□□□□□ -1.64
UPK1BO75841 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1BO75841 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
UPK1BO75841 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UPK1BO75841 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 AC083843.2-201ENST00000568248 6253 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms