Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 AC130304.1-201ENST00000622942 2385 ntBASIC2.41□□□□□ -2.02
USH2AO75445 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 NXF4-202ENST00000416098 1465 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AL137100.1-201ENST00000556703 1620 ntBASIC2.41□□□□□ -2.02
USH2AO75445 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AC022164.1-201ENST00000568767 2673 ntBASIC2.41□□□□□ -2.02
USH2AO75445 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
USH2AO75445 OR8A2P-201ENST00000528631 952 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC2.41□□□□□ -2.02
USH2AO75445 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 AC015818.6-201ENST00000584274 634 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AC006133.1-201ENST00000617106 264 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AP003400.2-201ENST00000624036 666 ntBASIC2.41□□□□□ -2.02
USH2AO75445 MTCO1P1-201ENST00000624263 1081 ntBASIC2.41□□□□□ -2.02
USH2AO75445 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AC105046.1-201ENST00000566457 4997 ntBASIC2.41□□□□□ -2.02
USH2AO75445 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AC009948.5-201ENST00000624360 4406 ntBASIC2.4□□□□□ -2.02
USH2AO75445 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 OTOF-201ENST00000272371 7156 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC2.4□□□□□ -2.02
USH2AO75445 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC2.4□□□□□ -2.02
USH2AO75445 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
USH2AO75445 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 AC017079.1-201ENST00000333650 415 ntBASIC2.4□□□□□ -2.02
USH2AO75445 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC2.4□□□□□ -2.02
USH2AO75445 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC2.4□□□□□ -2.02
USH2AO75445 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.4□□□□□ -2.02
USH2AO75445 AC092106.1-201ENST00000444291 373 ntBASIC2.4□□□□□ -2.02
USH2AO75445 BZW1P1-201ENST00000454901 1240 ntBASIC2.4□□□□□ -2.02
USH2AO75445 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC2.4□□□□□ -2.02
USH2AO75445 AC010327.2-201ENST00000587647 488 ntBASIC2.4□□□□□ -2.02
USH2AO75445 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
USH2AO75445 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 AC092692.1-201ENST00000623625 2595 ntBASIC2.4□□□□□ -2.02
USH2AO75445 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC2.4□□□□□ -2.02
USH2AO75445 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
USH2AO75445 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
USH2AO75445 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USH2AO75445 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 IGKV7-3-201ENST00000357453 298 ntBASIC2.4□□□□□ -2.03
USH2AO75445 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 RAD23BP1-201ENST00000421404 1227 ntBASIC2.4□□□□□ -2.03
USH2AO75445 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AC015983.1-201ENST00000441577 373 ntBASIC2.4□□□□□ -2.03
USH2AO75445 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 AC009831.5-201ENST00000624000 3189 ntBASIC2.4□□□□□ -2.03
USH2AO75445 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 Z82217.1-201ENST00000625157 8149 ntBASIC2.4□□□□□ -2.03
USH2AO75445 CASC19-284ENST00000642142 1868 ntBASIC2.4□□□□□ -2.03
USH2AO75445 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 AL732292.1-201ENST00000426692 226 ntBASIC2.4□□□□□ -2.03
USH2AO75445 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 Z95152.1-201ENST00000453556 656 ntBASIC2.4□□□□□ -2.03
USH2AO75445 HMGN2P25-201ENST00000486956 268 ntBASIC2.4□□□□□ -2.03
USH2AO75445 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 PRELID3BP6-201ENST00000503839 571 ntBASIC2.4□□□□□ -2.03
USH2AO75445 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 MORF4L1P3-201ENST00000525966 950 ntBASIC2.4□□□□□ -2.03
USH2AO75445 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AC011944.2-201ENST00000624440 683 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms