Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 AC016930.1-201ENST00000468766 2205 ntBASIC8.54□□□□□ -1.04
RNF40O75150 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF40O75150 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF40O75150 UGT2B26P-201ENST00000508672 1613 ntBASIC8.54□□□□□ -1.04
RNF40O75150 AP003119.3-201ENST00000566747 4192 ntBASIC8.54□□□□□ -1.04
RNF40O75150 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF40O75150 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 AC007614.2-201ENST00000569877 1851 ntBASIC8.53□□□□□ -1.04
RNF40O75150 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
RNF40O75150 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
RNF40O75150 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 RNU1-21P-201ENST00000363327 163 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RNU6-1085P-201ENST00000363576 107 ntBASIC8.53□□□□□ -1.04
RNF40O75150 Y_RNA.401-201ENST00000383965 117 ntBASIC8.53□□□□□ -1.04
RNF40O75150 Y_RNA.459-201ENST00000384251 102 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RNU6-1105P-201ENST00000384774 107 ntBASIC8.53□□□□□ -1.04
RNF40O75150 MIR128-2-201ENST00000384893 84 ntBASIC8.53□□□□□ -1.04
RNF40O75150 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 RNU6-908P-201ENST00000410160 94 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RNA5SP118-201ENST00000410385 109 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RNA5SP265-201ENST00000411023 111 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RN7SKP85-201ENST00000411349 318 ntBASIC8.53□□□□□ -1.04
RNF40O75150 JKAMPP1-201ENST00000413804 919 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AL157884.1-201ENST00000424561 454 ntBASIC8.53□□□□□ -1.04
RNF40O75150 SDCBPP2-201ENST00000424643 885 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 AL358934.1-201ENST00000432346 324 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RPL21P88-201ENST00000436649 436 ntBASIC8.53□□□□□ -1.04
RNF40O75150 SNX18P9-201ENST00000440580 835 ntBASIC8.53□□□□□ -1.04
RNF40O75150 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 AL121877.1-201ENST00000453704 622 ntBASIC8.53□□□□□ -1.04
RNF40O75150 SCDP1-201ENST00000455244 1081 ntBASIC8.53□□□□□ -1.04
RNF40O75150 RPS20P20-201ENST00000460498 340 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AC021660.1-201ENST00000465006 554 ntBASIC8.53□□□□□ -1.04
RNF40O75150 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 AC109811.2-201ENST00000509609 452 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AP003122.4-201ENST00000530980 758 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 ATP5F1P7-201ENST00000567330 760 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC8.53□□□□□ -1.04
RNF40O75150 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.53□□□□□ -1.04
RNF40O75150 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.53□□□□□ -1.04
RNF40O75150 7SK.7-201ENST00000603504 247 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AL136363.1-201ENST00000605349 337 ntBASIC8.53□□□□□ -1.04
RNF40O75150 OR1X1P-201ENST00000606159 931 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.53□□□□□ -1.04
RNF40O75150 AC015908.5-201ENST00000623289 343 ntBASIC8.53□□□□□ -1.04
RNF40O75150 AL109806.1-201ENST00000623967 1248 ntBASIC8.53□□□□□ -1.04
RNF40O75150 TEX41-265ENST00000627785 704 ntTSL 5 BASIC8.53□□□□□ -1.04
RNF40O75150 AC183089.2-201ENST00000637931 916 ntBASIC8.53□□□□□ -1.04
RNF40O75150 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.53□□□□□ -1.04
RNF40O75150 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 ZNF887P-201ENST00000431363 1407 ntBASIC8.53□□□□□ -1.04
RNF40O75150 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
RNF40O75150 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RNF40O75150 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.52□□□□□ -1.04
RNF40O75150 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RNF40O75150 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RNF40O75150 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms