Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AP002360.3-201ENST00000607673 710 ntBASIC7.37□□□□□ -1.23
SOX1O00570 AC118658.2-201ENST00000618697 459 ntBASIC7.37□□□□□ -1.23
SOX1O00570 AC009509.4-201ENST00000619202 509 ntBASIC7.37□□□□□ -1.23
SOX1O00570 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX1O00570 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
SOX1O00570 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
SOX1O00570 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX1O00570 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SOX1O00570 AC087359.1-201ENST00000508335 1740 ntBASIC7.37□□□□□ -1.23
SOX1O00570 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SOX1O00570 AL449283.1-201ENST00000602631 3403 ntBASIC7.37□□□□□ -1.23
SOX1O00570 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
SOX1O00570 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX1O00570 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX1O00570 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX1O00570 MTCO1P28-201ENST00000574177 1528 ntBASIC7.37□□□□□ -1.23
SOX1O00570 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SOX1O00570 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX1O00570 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SOX1O00570 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX1O00570 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 AL603750.1-201ENST00000624216 1717 ntBASIC7.36□□□□□ -1.23
SOX1O00570 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 MIR1272-201ENST00000408106 129 ntBASIC7.36□□□□□ -1.23
SOX1O00570 PGBD4P8-201ENST00000412993 562 ntBASIC7.36□□□□□ -1.23
SOX1O00570 OR2AT2P-201ENST00000413438 905 ntBASIC7.36□□□□□ -1.23
SOX1O00570 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.36□□□□□ -1.23
SOX1O00570 AL157884.1-201ENST00000424561 454 ntBASIC7.36□□□□□ -1.23
SOX1O00570 ZNF863P-201ENST00000426746 417 ntBASIC7.36□□□□□ -1.23
SOX1O00570 NANOGP4-201ENST00000427230 913 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 RPS10P21-201ENST00000430654 475 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC005189.1-201ENST00000431286 310 ntBASIC7.36□□□□□ -1.23
SOX1O00570 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 AL121601.2-201ENST00000438019 707 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AL671855.1-201ENST00000446875 1203 ntBASIC7.36□□□□□ -1.23
SOX1O00570 CCRL1P1-201ENST00000449542 1053 ntBASIC7.36□□□□□ -1.23
SOX1O00570 TVP23CP1-201ENST00000450317 639 ntBASIC7.36□□□□□ -1.23
SOX1O00570 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 AC016687.1-201ENST00000482574 353 ntBASIC7.36□□□□□ -1.23
SOX1O00570 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 AC109458.1-201ENST00000508858 316 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 AC011352.2-201ENST00000514574 1016 ntBASIC7.36□□□□□ -1.23
SOX1O00570 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.36□□□□□ -1.23
SOX1O00570 IGKV3D-25-201ENST00000519599 235 ntBASIC7.36□□□□□ -1.23
SOX1O00570 ST13P6-201ENST00000522430 1102 ntBASIC7.36□□□□□ -1.23
SOX1O00570 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AP000435.1-201ENST00000528539 496 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC007537.1-201ENST00000539347 327 ntBASIC7.36□□□□□ -1.23
SOX1O00570 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.36□□□□□ -1.23
SOX1O00570 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 AC090607.2-201ENST00000560331 695 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX1O00570 SNORD95-201ENST00000579879 68 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC008507.3-201ENST00000585753 472 ntBASIC7.36□□□□□ -1.23
SOX1O00570 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 AC090181.2-201ENST00000602975 672 ntBASIC7.36□□□□□ -1.23
SOX1O00570 AC096553.1-201ENST00000605169 829 ntBASIC7.36□□□□□ -1.23
SOX1O00570 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 AC107075.1-201ENST00000613695 314 ntBASIC7.36□□□□□ -1.23
SOX1O00570 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SOX1O00570 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.36□□□□□ -1.23
SOX1O00570 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 AL512329.1-201ENST00000404600 1592 ntBASIC7.36□□□□□ -1.23
SOX1O00570 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX1O00570 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
SOX1O00570 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms