Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM1O00151 AC078899.1-201ENST00000521432 1185 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AP001858.2-201ENST00000536213 601 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 AC126615.2-201ENST00000553003 515 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM1O00151 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM1O00151 OR1E3-201ENST00000575608 948 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AL591167.1-201ENST00000607321 456 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AL133243.2-201ENST00000610331 1621 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 MIR6811-201ENST00000620409 58 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AC090181.3-201ENST00000624777 1514 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDLIM1O00151 RPL11P4-201ENST00000332269 436 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 RNU1-49P-201ENST00000363468 159 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 RN7SKP28-201ENST00000364770 305 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 RN7SKP86-201ENST00000410454 332 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM1O00151 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.6□□□□□ -1.51
PDLIM1O00151 AC073909.1-201ENST00000447112 999 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 OR52I1-201ENST00000450052 1050 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 FRG2FP-204ENST00000453982 852 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 RN7SL369P-201ENST00000477138 299 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 SNX18P24-201ENST00000505249 671 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM1O00151 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM1O00151 KHDC1P1-201ENST00000511053 508 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM1O00151 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM1O00151 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.6□□□□□ -1.51
PDLIM1O00151 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM1O00151 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PDLIM1O00151 AC005632.2-201ENST00000564271 828 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 AC090826.1-203ENST00000569235 490 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 RN7SL230P-201ENST00000580835 303 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 AC141002.1-201ENST00000607025 279 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 AC022106.1-201ENST00000612834 766 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM1O00151 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.6□□□□□ -1.51
PDLIM1O00151 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 AC111152.1-202ENST00000635848 339 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM1O00151 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM1O00151 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM1O00151 AL731566.1-201ENST00000620490 1937 ntBASIC5.6□□□□□ -1.51
PDLIM1O00151 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDLIM1O00151 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM1O00151 TTC39DP-201ENST00000416781 1688 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AC020656.2-201ENST00000613291 5309 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM1O00151 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
PDLIM1O00151 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM1O00151 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC087752.1-201ENST00000391360 558 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 AL139805.1-201ENST00000407837 289 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 RN7SKP166-201ENST00000410812 305 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 RN7SKP121-201ENST00000410842 305 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC112492.2-201ENST00000432774 1030 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AC094019.1-201ENST00000434678 472 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM1O00151 TIMM8BP2-201ENST00000445940 251 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 RPS27P20-201ENST00000492051 246 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 RN7SL362P-201ENST00000494228 267 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 RNA5SP206-201ENST00000516703 121 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms