Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC011933.2-201ENST00000578539 2790 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 RN7SKP59-201ENST00000410520 314 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 OR10T1P-201ENST00000424327 947 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 SNORD125-201ENST00000459538 96 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC090638.1-201ENST00000498296 909 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 RPEP1-201ENST00000504507 658 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC092944.2-201ENST00000605443 889 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 AL359513.1-201ENST00000614364 557 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC132068.1-201ENST00000623805 459 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 SAMMSON-227ENST00000642114 1199 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC010168.2-201ENST00000562691 5428 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 C4BPAP1-201ENST00000415474 1893 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 CASC19-248ENST00000641674 1356 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC093829.1-201ENST00000506662 1618 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 RNA5SP335-201ENST00000363817 110 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 CYCSP12-201ENST00000437729 300 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 GAPDHP58-201ENST00000438477 1006 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC093270.2-201ENST00000486157 792 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC093763.2-201ENST00000505334 1223 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC126177.5-201ENST00000549599 178 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.28□□□□□ -1.08
HFM1A2PYH4 MIR7155-201ENST00000615925 56 ntBASIC8.28□□□□□ -1.08
HFM1A2PYH4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HFM1A2PYH4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
HFM1A2PYH4 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC018809.2-201ENST00000602436 3823 ntBASIC8.27□□□□□ -1.09
HFM1A2PYH4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 SNORA70-201ENST00000384436 135 ntBASIC8.27□□□□□ -1.09
HFM1A2PYH4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 RPS23P9-201ENST00000448848 438 ntBASIC8.27□□□□□ -1.09
HFM1A2PYH4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 AC010245.2-201ENST00000606908 1167 ntBASIC8.27□□□□□ -1.09
HFM1A2PYH4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HFM1A2PYH4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.09
HFM1A2PYH4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.26□□□□□ -1.09
HFM1A2PYH4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HFM1A2PYH4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
HFM1A2PYH4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HFM1A2PYH4 LCOR-201ENST00000286067 4542 ntBASIC8.26□□□□□ -1.09
HFM1A2PYH4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HFM1A2PYH4 AL162456.1-201ENST00000634535 2006 ntBASIC8.26□□□□□ -1.09
HFM1A2PYH4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HFM1A2PYH4 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms